Bdellovibrio bacteriovorus Tiberius: Bdt_0175
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Entry
Bdt_0175 CDS
T02356
Symbol
csdB
Name
(GenBank) hypothetical protein
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
bbat
Bdellovibrio bacteriovorus Tiberius
Pathway
bbat00450
Selenocompound metabolism
bbat01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bbat00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
Bdt_0175 (csdB)
Enzymes [BR:
bbat01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
Bdt_0175 (csdB)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
Bdt_0175 (csdB)
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GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AFX99884
UniProt:
K7YTF7
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All DBs
Position
176981..178210
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AA seq
409 aa
AA seq
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MSNLDDIFASARSQFPALTQLVHGKKLVYLDSGATTLKPQSVVDRIAHFYSYETSNVHRG
AHYLGDVATGHFEAARQKVAEFLGARQSEEIIFVRGTTEGVNLVANSWGLSNLKAGDEIL
ITVMEHHGNIVPWQMVAEKVGAKVVAADILDNGELDLEDFKKKLNSRTKMVAFTASSNVL
GTNTDMKLLTKLAHEVGAKVLVDGAQIVSQLPVNVSDIDCDFFVFSAHKIFGPFGFGAVY
GKKETLDQMPPYQGGGSMISKVTIEKTTFNDVPTRFEAGTPHVEGAVGLHAALTFVENIG
LDKIHKYEMDLLNYATGKLLEIPDVKIYGTSQNKGAILSFNLKGAHHSDIGQILDQEGVA
VRAGHHCTQPLMARLGVPGTVRASLSVYNNREDIDSMVKAVVKAREMLL
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatctagacgacatatttgcctctgcaagatcccagtttccagccctgactcag
ttggttcatggcaagaaactggtttatctggacagtggtgcgacaactttgaagccgcag
tcggtggtcgaccgtattgcgcatttttattcttatgaaacctccaatgttcatcgtggc
gcgcactatctgggtgacgtggcgacagggcatttcgaagcggctcgccagaaggtggcc
gaattcctgggcgcacgtcagtccgaggaaatcatctttgttcgcggaaccaccgagggt
gtgaatctggtggcgaattcctggggtctttcaaatttgaaggccggggatgaaattctg
atcaccgtgatggagcatcacggaaacatcgtgccttggcagatggtcgcagaaaaagtc
ggcgcgaaagtcgtggcggcggatattctggacaacggtgagctggatcttgaagacttc
aaaaagaaattgaactctcgcacgaagatggtggcgttcaccgcgtcttcgaatgttctg
ggcaccaatacggacatgaagcttttgaccaagcttgctcatgaagtgggtgcgaaggtt
ctggtggacggggcgcagatcgtgtctcagctgccggtgaatgtttctgatattgattgc
gacttttttgtcttttctgcacacaaaattttcggcccgtttggttttggcgccgtgtac
ggaaaaaaagagaccctggatcagatgcccccttatcagggtggcggcagcatgatttcc
aaagtgacgattgaaaaaaccacgttcaacgatgtgccgactcgctttgaggccggaact
ccgcacgtggaaggcgcggtgggattgcatgcggccctgacgttcgttgagaacatcggt
ctggataagattcataaatatgaaatggatcttttgaactatgcgactggaaagcttctg
gagatcccggacgtgaaaatctacggaacctcccagaacaaaggggcgatcttgtccttt
aatctgaaaggcgctcaccactcggacattggtcagattctggatcaagagggtgtggca
gtcagagccggacaccattgtacgcagccgctgatggcgcgtctgggagttcccggcacc
gtcagagcctccctttcagtgtataataatcgtgaagatattgattctatggttaaagcc
gtggtgaaagcccgggagatgttgttatga
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