Bdellovibrio bacteriovorus Tiberius: Bdt_0253
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Entry
Bdt_0253 CDS
T02356
Name
(GenBank) ATP dependent helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
bbat
Bdellovibrio bacteriovorus Tiberius
Pathway
bbat03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bbat00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Bdt_0253
09124 Replication and repair
03420 Nucleotide excision repair
Bdt_0253
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbat03021
]
Bdt_0253
03036 Chromosome and associated proteins [BR:
bbat03036
]
Bdt_0253
03400 DNA repair and recombination proteins [BR:
bbat03400
]
Bdt_0253
Enzymes [BR:
bbat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Bdt_0253
Transcription machinery [BR:
bbat03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Bdt_0253
Chromosome and associated proteins [BR:
bbat03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
Bdt_0253
DNA repair and recombination proteins [BR:
bbat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Bdt_0253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
HBB
Motif
Other DBs
NCBI-ProteinID:
AFX99961
UniProt:
K7ZDY7
LinkDB
All DBs
Position
complement(260699..262984)
Genome browser
AA seq
761 aa
AA seq
DB search
MSGQEIHMAIQRRRQREFDDYTPEKKMSWVFEAGPYEFHISGRADGITENPVQIEEIKTA
FDVEELWRKLRADDNHPYIWQLRTYGYFHYKETGRIPFLNLHLVSSRNFKSMDLRVELDI
AHYELWLALRLDELVEETKVKEKLFKARQKMAEEMSFPFATPRPGQRELIESIEAQVADE
HPLLVQAPTGLGKTVGVLYPNLKDSLSRGQKTVYVTPKNSQHIVAEEAVEKLQEQGSKIR
SLTLTAKSKMCLKAETLCNPGYCEFAREYYTKLAEHDLVNKLSKKRTLTQEKLVEMGKEF
EVCPFELSVEAIERADVVIGDYNYAFAPRSLLGRLSEPLLEAGEKPNLVIDEAHNLPSRA
QDYFSPSLSVQELDILEGDFTKLPPTFSLQAGSLIRKAKSLIQEYGEDGGSRKVDIDIEP
FLDHERSIRALTTEYLESETEIITRDPMLRLMNLWSDFIAALEYRGPEFFTTYQNSRFTE
MLKVTCCDASEQLKIAYKQFKNVVAFSATLKPFTYYQELLGFDLESSKTLEFQSPFSPEN
RQLMIIPQISTKLSDRVVSSGKVAEVISRVTRVKAGNYIALFPSFEFLAQVEKQLQVPHL
RVLRQERDMKQLDVQIYLEELKAANEPILLLGVQGGVFSEGVDFPGDMLIGAFVIGPALP
SFDFEREQIRTYFDGRYGKENGFNYTYVYPAMAKAIQSAGRVIRSETDKGVIILMDSRFL
NPVYAEAMPQGWFKDSPRELVSQKILADLETFWKNSEAPCS
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggcaggaaatccatatggccattcagcgccgccggcagcgcgagtttgacgac
tatactccggaaaagaaaatgagctgggtttttgaggccgggccttatgaattccatatt
tccggacgtgccgatggcatcactgaaaacccggtgcagattgaagagatcaaaactgct
tttgatgtcgaagaactttggcgcaagcttcgtgctgatgacaatcatccctacatctgg
cagctgcgcacgtatggatactttcactacaaggaaaccgggcgcattccgtttttgaat
ctgcatctggtttcttcacgcaatttcaaatccatggatctgcgcgtggagctggacatc
gcccactatgaattgtggctggctttgcgcctggatgaactggttgaagaaaccaaggtc
aaagaaaagcttttcaaagcccgtcagaaaatggcggaagaaatgtccttcccgtttgcg
accccgcggcccggtcagcgcgagctgattgaaagcatcgaagcccaggtggccgatgaa
cacccgttgctggtgcaggccccgacgggccttggaaaaaccgtgggtgtgctttatccc
aacttgaaggactctttgtcgcgcgggcaaaagaccgtttatgtgactccgaaaaactca
cagcacatcgtcgctgaagaagcggtggaaaaactgcaggaacaaggcagtaagatccgt
tctttgaccctgacggcaaaaagcaaaatgtgcctgaaggcggaaaccctgtgcaatccg
ggttattgcgaatttgcgcgcgaatactacaccaaacttgccgagcacgatctggtgaac
aaactttccaaaaagcgcacactgactcaggaaaagcttgtcgaaatgggcaaagagttc
gaagtctgcccgtttgaactttccgtcgaagccatcgagcgtgctgacgtcgtgattggt
gattacaactatgccttcgccccgcgcagtctgctgggccgtctttccgaacctttactg
gaagccggcgaaaaacccaatctggtgattgatgaagctcacaatctgcccagccgggcg
caggactatttctcgccatctttgagtgtgcaggaactggatattctggaaggtgatttc
acaaagctgccgccgacgttttctttgcaagccgggtccttgatccgcaaagccaagtcg
ctgatacaagagtatggcgaagacggcggttcccgcaaagtcgacattgatattgaacct
ttcctggatcatgagcgttcgattcgcgccctgaccacggaataccttgaaagcgaaacc
gaaatcatcacccgtgatccgatgctgcgcctgatgaatctgtggagcgactttattgcc
gccctggaatacagggggccggaattctttacgacttatcaaaacagccgtttcacggaa
atgctgaaagtcacctgttgcgatgcctctgagcagctaaagatcgcctataagcagttt
aagaacgtcgtggcattttcagcgaccctgaaaccatttacttactatcaggaacttttg
gggtttgatctggaaagctccaaaaccctggaattccagtcaccattcagccctgaaaac
cgtcagttgatgatcatcccgcagatttcaactaaactgagcgaccgcgtggtcagttcg
ggcaaagtggccgaggtcatttcccgggtcacacgcgtgaaggctggaaactacattgcc
ctgttcccaagttttgagtttttagcacaagttgaaaaacaactgcaggtgccgcatctg
cgtgtgcttcgccaggaacgcgacatgaagcagctggatgtgcaaatctatctggaagaa
ctgaaagccgccaacgaacctatcttgttgttaggtgtgcaaggcggtgtgttttctgaa
ggggtcgacttcccgggcgacatgctgatcggggcctttgtcattggaccggcgttaccc
agctttgattttgagcgtgaacagattcgcacttactttgacggccgctatggcaaagaa
aacggttttaactatacctatgtatatccagccatggccaaagccattcagtcggcaggc
cgggtgatccgatctgaaaccgacaagggtgtgatcatcctgatggacagccgcttcttg
aatccggtttacgccgaagccatgccccaaggctggtttaaggacagcccgcgtgaactg
gtgtcgcaaaaaattctggctgaccttgaaaccttctggaaaaacagcgaagcgccatgc
tcttaa
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