Bdellovibrio bacteriovorus Tiberius: Bdt_0740
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Entry
Bdt_0740 CDS
T02356
Symbol
pdhD
Name
(GenBank) dihydrolipoamide dehydrogenase, E3 subunit
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
bbat
Bdellovibrio bacteriovorus Tiberius
Pathway
bbat00010
Glycolysis / Gluconeogenesis
bbat00020
Citrate cycle (TCA cycle)
bbat00260
Glycine, serine and threonine metabolism
bbat00280
Valine, leucine and isoleucine degradation
bbat00310
Lysine degradation
bbat00380
Tryptophan metabolism
bbat00620
Pyruvate metabolism
bbat00630
Glyoxylate and dicarboxylate metabolism
bbat00640
Propanoate metabolism
bbat00670
One carbon pool by folate
bbat00785
Lipoic acid metabolism
bbat01100
Metabolic pathways
bbat01110
Biosynthesis of secondary metabolites
bbat01120
Microbial metabolism in diverse environments
bbat01200
Carbon metabolism
bbat01210
2-Oxocarboxylic acid metabolism
bbat01240
Biosynthesis of cofactors
Module
bbat_M00009
Citrate cycle (TCA cycle, Krebs cycle)
bbat_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
bbat_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
bbat_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
bbat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
Bdt_0740 (pdhD)
00020 Citrate cycle (TCA cycle)
Bdt_0740 (pdhD)
00620 Pyruvate metabolism
Bdt_0740 (pdhD)
00630 Glyoxylate and dicarboxylate metabolism
Bdt_0740 (pdhD)
00640 Propanoate metabolism
Bdt_0740 (pdhD)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Bdt_0740 (pdhD)
00280 Valine, leucine and isoleucine degradation
Bdt_0740 (pdhD)
00310 Lysine degradation
Bdt_0740 (pdhD)
00380 Tryptophan metabolism
Bdt_0740 (pdhD)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Bdt_0740 (pdhD)
00670 One carbon pool by folate
Bdt_0740 (pdhD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bbat04147
]
Bdt_0740 (pdhD)
Enzymes [BR:
bbat01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
Bdt_0740 (pdhD)
Exosome [BR:
bbat04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
Bdt_0740 (pdhD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_oxidored
GIDA
NAD_binding_8
HI0933_like
FAD_binding_2
DAO
FAD_binding_3
Thi4
Lys_Orn_oxgnase
AlaDh_PNT_C
Lycopene_cycl
UDPG_MGDP_dh_N
XdhC_C
3HCDH_N
NAD_binding_7
2-Hacid_dh_C
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
AFY00447
UniProt:
K7ZEG9
LinkDB
All DBs
Position
complement(754027..755448)
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AA seq
473 aa
AA seq
DB search
MQNFDVVVIGAGPGGYVAAIRSAQLGFKTAVIEREFLGGVCLNVGCIPSKAMITATHLLH
KAQHNFKEMGLNIKGGIDVDMKQLVKWKQSVSDKMSGGVNQLLKGYGVTIIKGEAEFKTS
KEISVKSSAGTEAVQAKYFIVATGSRPIEIPGFKFDEKDICSSTGALAFDTIPKRVAVIG
GGYIGLEISSYLRKLGTEVTVIEAQTALLAGVVDPDCAQIVTRKLTKAGVNVLYGAKAKG
QKKVKDGYEVTVEINGKDEVVKCDKILVTVGRRPNGDQANLKAAGIAVDERGFVKVDAQR
RTNVSNIFAIGDICGQPMLAHKASHEGVLVAEVIAGHNRVYDAKTVPAVVFTDPEIAAAG
MTEAEAKAKGHTDLLISKFPFAANGRAVSMMETDGFVKMIADKKTHVLLGVHIVGPEASN
LISEAVLAIEMGARIEDLALSIHPHPTLGETMMEAAEATLGHAIHIIQKPLKA
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaattttgacgtagtagttattggtgcgggtccgggcggttatgtggctgcgatc
cgttccgcacaacttggttttaaaacagcagttatcgaacgtgaattcctgggtggcgtg
tgcttgaacgtgggttgtatcccgtccaaagccatgatcactgcgactcaccttttgcac
aaagctcagcacaatttcaaagaaatgggcttgaacatcaaaggtggcatcgacgtggac
atgaaacaacttgtgaaatggaaacaatccgtttctgacaagatgtccggcggtgtgaac
cagcttcttaaaggttatggcgtcaccatcatcaagggtgaagctgaattcaagacctcc
aaagaaatctctgtgaagtcttctgccggcactgaagcagttcaggcgaaatacttcatc
gtggcaacaggttcccgtccgattgaaatccctggtttcaaattcgacgaaaaagatatc
tgttcttccacgggcgcattggcgttcgacaccatccctaagcgcgtggcggttatcggt
ggtggttacatcggtctggaaatctcttcttacctgcgtaagttgggcactgaagtgact
gtgattgaagctcagacagcattgctagcgggcgtggttgatccggattgcgctcagatc
gtgactcgcaaactgactaaagcgggcgtgaatgttctttacggagcaaaagccaaaggt
cagaaaaaagtcaaagacggttacgaagtcactgtcgagatcaacggcaaagacgaagtt
gttaaatgcgacaaaatccttgtaaccgtaggccgtcgtccaaatggcgatcaggcgaat
ctgaaagcggctggcattgctgttgacgagcgtggcttcgtgaaagtcgatgctcaacgc
cgcacgaatgtttcaaacatcttcgctatcggtgatatctgtggtcagccaatgctggcg
cacaaagcatcccatgaaggtgtccttgttgctgaagtgatcgcgggccataaccgtgtt
tacgatgcgaaaacagttccagctgttgtcttcacggatcctgaaatcgcagcagccggc
atgactgaagctgaagcaaaagccaaaggtcacacagatcttctgatcagcaagttcccg
ttcgcagccaacggccgcgcggtgagcatgatggaaacagacggtttcgtgaaaatgatc
gctgataagaaaacccacgtattgttgggcgttcacatcgtcggtccggaagcttccaac
ttgatctctgaagcagttctggcgattgaaatgggcgctcgtatcgaagacctggctctt
tccatccaccctcacccaactctgggtgaaaccatgatggaagccgctgaggcgactttg
ggtcacgcgatccatatcattcaaaaacctttgaaagcctaa
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