Bdellovibrio bacteriovorus Tiberius: Bdt_1377
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Entry
Bdt_1377 CDS
T02356
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
bbat
Bdellovibrio bacteriovorus Tiberius
Brite
KEGG Orthology (KO) [BR:
bbat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bbat03009
]
Bdt_1377 (dbpA)
Enzymes [BR:
bbat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Bdt_1377 (dbpA)
Ribosome biogenesis [BR:
bbat03009
]
Prokaryotic type
rRNA helicases
Bdt_1377 (dbpA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
ERCC3_RAD25_C
DUF2947
Motif
Other DBs
NCBI-ProteinID:
AFY01075
UniProt:
K7YWI5
LinkDB
All DBs
Position
complement(1454491..1455879)
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AA seq
462 aa
AA seq
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MSQNQFSSLPLSPELLAVVQELGFETLTPIQQESIPLLLAGKDLIGQAKTGSGKTAAFSL
PILNKIQIDLPELQALILCPTRELASQVVTEIRKLGRRLPGLKVLAMTGGQSGREQADAL
ENGVQIVVGTPGRLADFVGRSRIDLSAVKTVVLDEADKMLDMGFADEIKTVMRDLPGSRQ
TVLFSATFPESIEHLSRKYQRHAQQVIIEDEEQNLIEQLVYDSEDDDKTNVLMRILQQHP
SDSTIIFCNTKNAVAEIAERLNDLGAASGCLHGDMEQRERDRVMAMFRNGSHRILVATDV
AARGLDIDNLELVINFDLPLSPEIYVHRIGRTGRAGKTGVAVTIADPKDTLKLGQFEELT
GGKFARPSLGFKNQYGLNKTLKEAPMKTISISGGRKDKLRPGDILGALTGAAGGLTSADV
GKIEIQDKISFVAVSAKVADGAMQKLRDGRIKGQKFQVKFVK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgcaaaatcaattctcatctcttcccctgtcccccgaactgctggctgttgttcag
gaactgggttttgagacactgacacccatccagcaggaaagcatcccgctgcttctggcg
ggcaaggacctgatcggtcaggccaaaaccggcagtggaaaaaccgcggcgttctcactt
ccgatcctgaacaaaatccagatcgacctgccagaactgcaagccctgattctgtgcccg
acccgcgagctggcaagtcaggttgtcaccgaaatccgcaaactgggccgtcgtctgccg
ggcttgaaagttctggcgatgaccggaggccaatccggccgtgaacaagcggacgctttg
gaaaacggtgtgcagattgtcgtcggcactccaggccgtctggccgactttgtcggccgc
agccgcattgatctttctgcggtgaaaaccgtggtcctggatgaagctgacaaaatgctg
gatatgggttttgccgatgaaatcaaaaccgtgatgcgcgacctgccaggatcacgccag
accgtcttgttttctgcgaccttcccggaatccatcgaacatctttcccgcaagtaccag
cgccacgcccaacaggtgatcatcgaggatgaagagcaaaacctgatcgaacaactggtt
tacgacagcgaagacgatgacaaaaccaatgtgctgatgcgcattttgcaacagcatccg
tccgattccaccatcatcttctgcaacaccaaaaatgccgtggcggaaatcgcagaacgc
ctgaatgacctgggagctgccagcggctgcctgcatggagacatggaacagcgtgaacgt
gatcgcgtgatggcgatgttccgcaacggatcccaccgtatactggttgccaccgacgtg
gcagcgcgcggtcttgatatcgacaatctggaactggttattaactttgacctgcctctg
tccccggaaatctatgttcaccgtatcggtcgtaccggccgagctggcaaaaccggcgtg
gcagtcacgattgctgaccctaaagacacgctgaaactgggccagtttgaagaactgacc
ggtggcaaattcgcccgtccgtccctgggttttaaaaatcagtatggtttgaacaaaacc
ctgaaagaagctccgatgaaaaccatctcgatctcgggaggccgcaaggacaagctgcgt
cccggcgacattctgggggccctgaccggagctgccggtggtttgacttctgcggatgtg
ggtaaaatcgaaattcaggacaagatttctttcgtggcggtgtctgcgaaagttgcggac
ggcgccatgcaaaagctgcgtgacggtcgcatcaaaggtcaaaagttccaggttaaattt
gtaaagtaa
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