Bdellovibrio bacteriovorus Tiberius: Bdt_1395
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Entry
Bdt_1395 CDS
T02356
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bbat
Bdellovibrio bacteriovorus Tiberius
Pathway
bbat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bdt_1395 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbat03019
]
Bdt_1395 (deaD)
03009 Ribosome biogenesis [BR:
bbat03009
]
Bdt_1395 (deaD)
Enzymes [BR:
bbat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Bdt_1395 (deaD)
Messenger RNA biogenesis [BR:
bbat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Bdt_1395 (deaD)
Ribosome biogenesis [BR:
bbat03009
]
Prokaryotic type
rRNA helicases
Bdt_1395 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Cas3-like_C_2
Helicase_RecD
CMS1
ERCC3_RAD25_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AFY01093
UniProt:
K7YTY1
LinkDB
All DBs
Position
complement(1467977..1469761)
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AA seq
594 aa
AA seq
DB search
MAAMADMGFTTPTPIQRQALPILLAGANDFIGLASTGTGKTAAFGIPLIENIDSTTKDTQ
ALVLSPTRELALQVAEQLTLLGKKKGVRVVTIYGGASYRTQIDGVKRGAHIVVATPGRLV
DFLEQKMIKLQSVKTVVLDEADEMLSMGFKEALETILSATQPEDSDSVRAACRTWLFSAT
MSSEVRRLTSTYLENPETVSVNKVGGTADTIEQIYYTVKNSYKTEVIARLLQTAPEFYGI
IFCQTKMEVAELADILTQRGFPADSLHGDKSQQEREATLKKFKQRQVKVIVATDVAARGL
DIKDLTHVVNHSLPWDSESYVHRIGRTGRNGQKGTAITLVNPEQLTLLRRVMQNTKAVLT
KGVVPSADEVAGLKIKDVMDKVSTMDAESVPLQLAMDLIQDLIQAEDINFKELSKEELLG
RFIAAYFPNVFVKKDLMLDYMGDRVPRELLPRDPNDNRFSRGRGGDRRDDRDDSRARRPF
GGGRGASAPARGFRSEGARAEFNGGEVRAERTERPVFRDRPERTERPERSERAERAERSE
RSYRASGNSDSRPPRAERSERSERPQRSETDRPERRGDHPGIKRFRGPKRQFRD
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgatggcagacatgggcttcaccactccaactccgatccagcgtcaggctttg
ccgattctgctggctggtgccaatgactttatcggtctggcatccactggtacgggtaaa
accgctgccttcggtatcccgctgattgaaaacatcgacagcaccaccaaagacactcag
gctcttgtcctgagcccaacgcgtgagctggctctgcaagtggcagaacagctgactttg
ctgggtaagaaaaaaggcgttcgcgtagtaaccatctacggtggcgcttcttaccgcaca
cagatcgacggtgttaaacgtggcgcgcacattgttgtggcgactccgggccgtctggtt
gatttccttgaacagaaaatgatcaaacttcagagcgttaaaactgtcgttctggatgaa
gctgacgaaatgctttccatgggtttcaaagaagctctggaaacaattctttctgcaact
cagccggaagattctgactctgtacgtgcggcttgccgtacgtggttgttctctgcaacc
atgtcttctgaagttcgtcgtttgacttccacttaccttgaaaaccctgaaactgtatct
gtgaacaaagtgggcggcactgctgacactatcgagcagatctactacacagttaaaaac
tcctacaaaacagaagtgattgcacgcttgctgcaaactgctccggaattctatggcatc
attttctgccagacgaaaatggaagtggcagagcttgctgacattctgacccagcgtgga
ttcccggcggattctctgcacggtgacaagtcccagcaggaacgtgaagcgactttgaag
aaattcaaacagcgtcaggtgaaagtgatcgtggcaacagacgttgctgcccgcggtctg
gacatcaaggatctgactcacgttgtgaatcactctttgccttgggattctgaatcttac
gttcaccgtatcggccgtaccggtcgtaatggtcaaaaaggaactgcaatcactttggtg
aatccagagcaactgactcttcttcgccgtgtgatgcaaaacacgaaagccgttttgacc
aaaggtgttgttccttctgctgatgaagtggctggtctgaaaatcaaagacgttatggat
aaagtcagcacaatggacgctgaatccgtgccattgcaactggcgatggacctgatccag
gatctgatccaggctgaagacatcaacttcaaagagctttccaaagaagagcttctgggt
cgctttatcgcggcttacttcccgaacgtgttcgtgaagaaagatctgatgctggactac
atgggcgaccgcgttcctcgtgaattgttgccacgtgatccaaacgacaaccgcttctct
cgcggccgtggtggtgatcgtcgtgatgaccgtgacgattcccgtgcccgccgtccattc
ggtggcggccgtggcgccagcgcccctgcccgtggcttccgttctgaaggtgctcgcgct
gagttcaacggaggcgaagtgcgtgcagaaagaactgaaagaccggttttccgtgaccgc
ccggaaagaactgaacgtcctgagcgcagcgaacgtgctgaacgcgcagagcgttccgag
cgttcttaccgtgcttccggcaacagcgactctcgtccgcctcgcgctgaacgcagtgag
cgttctgagcgccctcagcgttccgagacagaccgtccagagcgtcgtggtgaccaccca
ggcatcaaacgcttccgtggtcctaaacgtcagttccgcgactaa
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