Bdellovibrio bacteriovorus Tiberius: Bdt_1544
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Entry
Bdt_1544 CDS
T02356
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bbat
Bdellovibrio bacteriovorus Tiberius
Brite
KEGG Orthology (KO) [BR:
bbat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bbat03016
]
Bdt_1544 (truB)
Enzymes [BR:
bbat01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Bdt_1544 (truB)
Transfer RNA biogenesis [BR:
bbat03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Bdt_1544 (truB)
Prokaryotic type
Bdt_1544 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
HeH
Motif
Other DBs
NCBI-ProteinID:
AFY01239
UniProt:
K7Z9K0
LinkDB
All DBs
Position
1632509..1633435
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AA seq
308 aa
AA seq
DB search
MTNKNQFNGLLLVDKPSGISSHDVVARLRRILSTRGVGHSGTLDPMASGLMACLVNEGTK
LSQYILEGDKGYRLRAQFGIRTDTLDTTGETLETLPTGHLTRELILSEALKLQGEMEVEV
PIYSAIKVQGKKLYEYARGEQEVAIPKKVMKFWDVEPVEIGADWAEFDIKCSKGSYIRTW
IDLLGKALGCGAAMSGLRRTWSSPYKIDQAQTLEQIEASVKGGSLGPAFVPMELALPQVK
RIRIKGQDKVLLGNGQISHDLRSQLISAFNPDVDQYIQVLAQEGGELLAVVGLEPGRGFV
LRRVFKYS
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgacgaataaaaatcaattcaatggtctgctgctggtggataaaccttcagggatctcc
agccatgacgttgtggcgcgtttgcgccgtattctttccacgcgtggagtcgggcattcc
ggcactctggatccgatggcgtcaggcttgatggcctgcctggtgaacgagggcacaaag
ctcagccaatacatcctggaaggtgacaagggctaccgcctgcgtgcgcagttcgggatt
cgcactgacactctggatacaacgggtgaaaccctggaaactcttcccaccggtcatttg
acccgcgaactgattttgtccgaggcccttaagcttcagggcgaaatggaagtcgaagtg
cctatttactcggcaatcaaggtgcaaggtaaaaaactttacgaatacgcccggggcgaa
caggaagtggccattcccaagaaggtcatgaagttctgggatgtcgagccggtggaaatc
ggcgctgattgggctgaatttgatatcaaatgcagcaagggcagctatatccgcacctgg
atcgacctgctgggtaaggccttgggttgtggggcagcgatgagcggcctgcgccggaca
tggtcctcaccctataaaattgaccaggctcagaccctggagcagatcgaagcttcggtc
aaaggcggctctttaggccctgcttttgttcccatggagctggctttgcctcaggtgaaa
cgtattcgaatcaaaggtcaggacaaggtccttctgggcaatggccagatcagccatgac
ctgagatcccagcttatttcagccttcaaccccgatgtggaccagtatatacaggttctg
gcccaagaggggggcgagcttttggccgttgttggtctggagccgggccgggggttcgtt
ctacgcagggtatttaaatactcttga
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integrated database retrieval system
