Bdellovibrio bacteriovorus Tiberius: Bdt_2038
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Entry
Bdt_2038 CDS
T02356
Symbol
rbsB
Name
(GenBank) D-ribose periplasmic binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
bbat
Bdellovibrio bacteriovorus Tiberius
Pathway
bbat02010
ABC transporters
bbat02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
bbat00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Bdt_2038 (rbsB)
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Bdt_2038 (rbsB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bbat02000
]
Bdt_2038 (rbsB)
Transporters [BR:
bbat02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
Bdt_2038 (rbsB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
SBP_bac_3
ABC_sub_bind
Motif
Other DBs
NCBI-ProteinID:
AFY01724
UniProt:
K7ZAI5
LinkDB
All DBs
Position
complement(2137147..2138811)
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AA seq
554 aa
AA seq
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MKIEGQVAMRKGFEEEIEKFNKSNSDKIKVIPYVAGEGRKGILNQTTQLDDALKKTPNVI
VIQPTDNSALARGLQEANTKGIPVIAYDQYIVNGNLASFLTSDNYQGGRDNGDYIEKTFE
KGTTIRIVVFEYPQVSSTMDRVDGFFDSLREHSRNFKVLKRYQAVDPASGEVAVKQFLKD
FPEKGSVDLILTVNDGGGITIVKSLWEKKRTEIRHATFDGDPESVENIKNKRLTIIDSAQ
FCAELGRETARNLIAYLKKEKVPTKKLVPTFPVTAQSVKDYPGWMGRPSSKYVTVTPEKT
PVPVKTKSIPTSSTNRLIVKIGVAPLCPYLCEKGPGVWGGYIYDILKGIAQEHGFILQME
SIANTRLVSNLLSRKVNYIIVPSYMVRYLPNIRIVGPDLGMSYLGALVPLNYKDSLIDSE
SISTKKIVYADVGSEGSAEVFSTSGGSRVIKLTGSDVADRMIKMINDRRVDLALGDYNLL
SYSMGRKVGVNLKLVPTSLTGFSSLVLVSVPKEPEFGSVPQHLQNWFLQARQSGELESIL
NKYNLKDWHLMSQD
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgaaggccaggtggccatgcgaaaaggctttgaagaagagatcgaaaaattc
aacaaatcaaattctgataaaattaaagtgattccttatgtggctggcgaaggtcgtaaa
ggtattttgaatcagacgacccagctggatgacgcccttaaaaaaactccgaatgtgatt
gtgattcagccgaccgacaactcggctttggcgcgcggtctgcaagaggccaataccaag
ggtatcccggtcattgcgtacgatcagtatatcgtgaacgggaacctggcgtcgttttta
accagcgacaactatcagggtggtcgtgacaatggcgactatatcgaaaagacttttgaa
aagggcaccacaatccgtattgtggtctttgaatacccgcaggtgtcttccacgatggat
cgcgtggatgggttcttcgattctcttcgtgaacacagtcgcaacttcaaagttctgaag
cgttatcaggccgtggatccggcatcgggcgaagtggcagtaaaacagttcctgaaagac
tttccggaaaaaggcagcgtggatctgattctgaccgtaaatgacgggggtggcatcacg
atcgtgaaaagcctttgggagaaaaaacgcaccgagattcgtcatgccactttcgacggt
gatccggagtcggttgaaaatatcaaaaacaaaagactgacaatcatcgattccgcccag
ttctgtgcggagctggggcgcgagacggcgcgaaacctgattgcttatcttaagaaagaa
aaagtcccaaccaagaaactggttcccacttttccggtgacggctcagtcggtgaaggac
tatccggggtggatgggacgtccttcttccaagtatgtgacggtgacgccggaaaaaact
ccggtgccggtgaaaacgaaatccattccgacatcttctaccaatcgtctgattgtgaag
atcggcgtggcgccgctgtgcccgtatctttgcgaaaaaggcccgggtgtctggggtgga
tacatttatgacattctgaaaggtatcgctcaagaacatggatttatcctgcagatggaa
agtatcgccaacacccgattggtatcaaaccttctgtcgcgcaaggtgaattacatcatc
gttccttcctatatggttcggtatctgccgaacattcggatcgtgggtcctgacttgggc
atgagctatctgggcgctctggtgcctttgaattacaaagattccctgatcgacagtgaa
tccatttccactaaaaaaatcgtttatgccgatgtgggcagcgaaggcagtgcggaagtg
ttttccacttctggtggatcccgcgtgatcaagctgacaggttcggatgtggcagatcgt
atgatcaagatgatcaacgaccgtcgcgtggatctggcgctgggtgattacaatctgctg
agctattctatgggtcgcaaagtgggtgtgaacctgaaactggtgccgacttcattgact
ggctttagttctttggttcttgtcagtgtaccgaaagagcccgagtttggttctgttcct
cagcacctgcagaactggttcctgcaggcacgtcagagtggtgaattggaaagtattttg
aacaaatacaatctgaaagactggcacctgatgtctcaggattag
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