Bdellovibrio bacteriovorus Tiberius: Bdt_2041
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Entry
Bdt_2041 CDS
T02356
Symbol
dnaE
Name
(GenBank) hypothetical protein
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bbat
Bdellovibrio bacteriovorus Tiberius
Pathway
bbat03030
DNA replication
bbat03430
Mismatch repair
bbat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bdt_2041 (dnaE)
03430 Mismatch repair
Bdt_2041 (dnaE)
03440 Homologous recombination
Bdt_2041 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbat03032
]
Bdt_2041 (dnaE)
03400 DNA repair and recombination proteins [BR:
bbat03400
]
Bdt_2041 (dnaE)
Enzymes [BR:
bbat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Bdt_2041 (dnaE)
DNA replication proteins [BR:
bbat03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Bdt_2041 (dnaE)
DNA repair and recombination proteins [BR:
bbat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Bdt_2041 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AFY01727
UniProt:
K7ZFQ4
LinkDB
All DBs
Position
complement(2141159..2144656)
Genome browser
AA seq
1165 aa
AA seq
DB search
MEAACRVKAIAKKAAAMQMPAVALTDNGNMFGAVEFFFACKDNNVKPILGLDAYIAPGSR
LEKKQDRDQVNTGPRRLVLLAQNNDGYRNLCKLSSIGYQEGFYWKPRIDYEVIQQYNENL
ICLTGGLRGEVAESFLREGPDAALAKIRQLKEIFNDRLYLEMCRTGVAEWDRLNPFLLEA
SKITGVPVVASNDVHYMTQDDQMAQEVLICIGSNKTLSDESRFRLGTDEFYLKKPEQMQE
LFADVPEAISNTLQIMERCDVKFKLKDDQGKPIYHLPTFPTDDGLSLKEDIARKAKAGLL
VRFEEAAARGEMVPEDKIPEYDKRLEYELGIIDRMGFNGYFLIVQDFINWAKVNDIPVGP
GRGSGAGSLVAYVLRITDLDPLPNFLLFERFLNPERISMPDFDIDFCQDRRQEVIQYVTR
KYGQESVSQIITYGKLQARAAIKDVGRVLGMTFPEVDAVTKLIPDKLGINLKESMEMEPR
IGEMMEMNPTVNTLMDLAQRVEGMVRHAGIHAAGVIIADGQLVRHAPLYKGADGEQVVQY
DMKHAEKIGLIKFDFLGLKTLTHINHALKLILKNRGKKIQSQMIPMTDAATFEMMSRGDT
AGVFQFEGEGITDATRKIRPSSFADVTAITSLYRPGPMANIPDFTDRKHGKAPVEYLLED
TREVLSETYGIMVYQEQVMGIASRIAGYSLGEADMLRRAMGKKIKEEMDQHRERFMKGAI
ERGHDKQRSSDLFDLMYKFADYGFNKSHAAAYSVVTIQTAWLKCHYPAEFFAALLSTELS
DTEKIVKYSKDATKRGLTVRSPSVNYSDYLFDVHGDEIYFGLGAIKGVGQNAVEAIIEAR
NNLPDKKFTTLDEFFNSIDTRRVNKKVIECLIKAGAFDGFGAHRAQLVGGYQKYLDRAIG
LQKDREMGQSSLFDLGPSTETKVTLEEVKPWARTASLTYEKEVLGFYLSDHPLKGFDTLS
ELWTTCKVIDLPAQMPAPGSPEAEALKAAKKDWKNRDAGKKRVVVAGLITELRELITKKG
TRMAFGKVEDLTGNCELVIFPDSYARFEAQLRDERPVLVGGGLEVEDGSAKIMVDTVSPL
EDILKKTKRMVLRLDKINPDDYPRLQSLMKDYPGTTSVSLEIELGELNRRVLMEMEEAQG
ISVNNEFFEGVHSLFGRTDFIELRS
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
ttggaagccgcttgccgggtcaaagccattgctaaaaaagcagcggcgatgcagatgcct
gcggtggctcttactgacaacggcaacatgttcggtgctgttgaattcttctttgcctgt
aaggacaacaacgtaaaaccaattctgggtttggatgcgtacatcgcgccaggatctcgt
cttgaaaaaaagcaggaccgtgatcaggtcaacaccggaccacgccgtctggtgttgctg
gcgcaaaacaacgatggctatcgcaatctgtgtaaactttcttccatcggttaccaagag
ggcttttactggaagcctcgtatcgattacgaagtcattcagcagtataacgaaaatctg
atctgtctgacgggcggcttgcgcggtgaagttgcagagtccttcctgcgtgaagggccg
gatgcggctttggcgaaaatccgtcagctgaaagaaatcttcaacgaccgcctgtatctg
gagatgtgccgaacaggtgttgccgagtgggatcgcctgaatccattcctgctggaagct
tccaagatcaccggagttcctgttgtggcgtccaatgatgtgcactacatgactcaggat
gaccagatggctcaggaagttctgatctgtatcgggtcgaataaaactttgagcgatgaa
tcccgtttccgtctgggcacggatgaattttatctaaaaaaaccagagcagatgcaggag
ctgtttgcggatgtgcctgaggccatctccaacacacttcagatcatggaacgttgtgat
gtgaagttcaaactgaaagatgatcagggtaaaccgatctatcacctgccgacattcccg
acagatgatggtttgtctttgaaagaagacatcgcccgcaaagccaaagctggattgctg
gtgcgctttgaagaagctgccgcacgtggcgagatggtgccggaagacaagattccagaa
tacgacaagcgcctggaatacgagttgggcattatcgatcgcatgggctttaacggttac
ttcctgatcgtccaggacttcatcaactgggcaaaggtgaatgacattccggtgggtccg
gggcggggttccggtgccggttccctggtcgcttatgttctgcgaatcacggatttggat
ccacttcctaacttcctgttgtttgagcgtttcctgaatccagagcgtatttccatgccc
gatttcgatatcgacttctgtcaggatcgtcgtcaggaagtgattcagtatgtaacccgc
aagtatggtcaggaatccgtttctcagatcatcacctatggaaagctccaggcccgtgcc
gccatcaaggacgtggggcgtgtattgggtatgacattccctgaagtcgatgcggtaaca
aaacttattccagacaagctcggtatcaatctgaaagagtccatggaaatggaacctcgt
atcggcgagatgatggagatgaatccaacggtgaacaccctgatggatcttgcgcaaagg
gttgagggtatggttcgccatgccggtatccacgccgccggggttatcatcgccgatggt
cagctggttcgtcatgctccgctttacaagggcgctgacggcgagcaggtcgttcagtac
gacatgaaacacgccgaaaaaatcggcctgatcaagttcgacttcctgggtctgaagacc
ctgactcacatcaatcacgctttgaagctgattctgaaaaaccgtggcaaaaaaatccag
tcgcagatgattccgatgacggatgccgcgactttcgaaatgatgtcacgcggggatacg
gccggggtgttccagtttgagggtgagggcatcaccgatgccacccgtaaaatccgccct
tcttcgtttgctgatgtcactgcgatcacgtcgttgtaccgaccgggtccaatggcgaac
attccggactttaccgatcgtaagcacggtaaggcgccggtggaataccttctggaagac
acccgtgaagttttgtctgagacctacgggatcatggtctatcaggaacaggttatgggt
atcgcctcgcgcattgccggatattctctgggtgaagcggatatgcttcgtcgtgcgatg
ggtaagaaaatcaaagaggaaatggatcagcaccgcgaacgcttcatgaaaggggcgatt
gagcgcgggcatgacaaacaacgttcatcggatctgtttgatctgatgtataagttcgcc
gattacggtttcaataaatcccacgctgccgcgtactcggtcgtcactattcagacggcc
tggttgaaatgtcactatccggctgaattctttgcagctctgcttagtaccgagctttcc
gacacggaaaagatcgtaaagtattccaaagacgccaccaaacgtgggttgaccgtccgg
tccccaagtgtgaactattcggattatctgtttgatgttcatggcgacgagatttacttc
ggtctgggggcgattaaaggtgtgggacagaatgcggtcgaggccatcatcgaggcccgc
aacaatctgccagacaaaaagttcaccacgctggatgaattctttaattccatcgacacc
cgtcgtgtgaataaaaaagtgatcgagtgtctgatcaaagccggcgcctttgatggtttc
ggcgcgcaccgtgcacagctggtgggtggttatcagaagtatctggatcgcgccatcggt
ctgcaaaaagaccgcgaaatgggtcagtcttcattgtttgatctgggaccttcgacggaa
accaaagtgactttggaggaagtgaagccctgggcgcgaacagcctctttgacttacgaa
aaagaagttctgggtttttacctgagtgatcacccgttgaagggttttgacacgctttct
gagctttggacgacgtgcaaggtgattgacctgccagcacagatgccagctccgggcagt
ccggaagctgaagccctgaaggctgccaaaaaagactggaaaaaccgtgatgcgggtaaa
aaacgtgtcgtggttgcggggcttattacggagcttcgcgagctgatcacgaaaaaagga
actcgcatggcgttcggcaaggtcgaggacctgacaggcaactgcgagttggtgatcttc
ccggattcttatgcgcgttttgaagcgcaacttcgcgatgaaaggcctgtcctggtcggg
ggtggtctggaagtggaggatggttcggccaagatcatggttgatactgtttctccattg
gaagatatccttaaaaaaaccaagcgaatggtactaagattggataagattaatcctgat
gattacccgcgcctgcagtctttgatgaaggactatccggggacaacctcggtcagtctt
gaaatcgagctgggtgagctgaaccgccgtgtcctgatggagatggaagaggctcagggg
atcagtgtgaataatgaattctttgaaggcgttcattccctgtttggaagaacggacttt
atcgagttgaggagctag
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integrated database retrieval system
