Bdellovibrio bacteriovorus Tiberius: Bdt_2496
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Entry
Bdt_2496 CDS
T02356
Symbol
ybbB
Name
(GenBank) tRNA 2-selenouridine synthase
KO
K06917
tRNA 2-selenouridine synthase [EC:
2.9.1.3
]
Organism
bbat
Bdellovibrio bacteriovorus Tiberius
Brite
KEGG Orthology (KO) [BR:
bbat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bbat03016
]
Bdt_2496 (ybbB)
Enzymes [BR:
bbat01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.3 tRNA 2-selenouridine synthase
Bdt_2496 (ybbB)
Transfer RNA biogenesis [BR:
bbat03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Bdt_2496 (ybbB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhodanese
AAA_18
T2SSE
DUF1378
TsaE
AAA_22
AAA_24
AAA_16
Adeno_IVa2
Motif
Other DBs
NCBI-ProteinID:
AFY02179
UniProt:
K7ZB89
LinkDB
All DBs
Position
complement(2634966..2636105)
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AA seq
379 aa
AA seq
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MSLKNIKPDELKRLFQQNIPLMDVRAPVEFQQGSIPGAVNLPIMTDEERARVGTVYKNQG
NEAAVKLGHELVSGAVKEQRVNAWKSFVTANPEAVFYCFRGGQRSRISQAWLKEAGIERP
LLTGGYKAARNYLIKQIEEFSVRQELIAVSGPTGSGKTHFLRGLKDHPIIDLEALARHRG
SAFGNWEVPQPTQVDYENHLAREILLLEDKIQGKIKPLVEDESRLIGRISQPATFFIRLR
SSPVIWIDEPLEVRTDNVFEDYILNSSIGQSLASTPRCAEENDILRGQALQLFARYRQSL
QAIHRKLGGLRTQEVMADLENAELQYLNHAELSGNKVWIEKLLQYYYDPMYLGSLDRRHV
TVLFKGTRIEAEKFVHGLR
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
ttgagccttaaaaacatcaagcccgatgaattaaaacgactgttccagcaaaacatcccg
ttgatggatgttcgcgcccctgtggagtttcagcagggctcaattcccggagccgtcaat
ctgccaatcatgacggatgaagagcgggcccgggttggaacggtttacaaaaatcaggga
aatgaagcggccgtcaagctggggcatgagctggtttccggcgccgtgaaagagcagcgc
gtgaacgcctggaaaagttttgtcacggccaatcccgaagcggtcttttactgtttccgg
ggcggtcagcgttcgcgcatttctcaggcctggttgaaagaggccgggattgaacgtccg
cttttgaccggaggctataaggccgcccgcaattatctgatcaaacaaattgaggaattt
tccgtcagacaagagctgatcgcagtgtccggtcccactggcagcgggaagacgcatttt
ctgcgtggactgaaggaccatccgataattgatctggaggcgttggctcggcaccgaggc
tcggcctttggcaattgggaagttccgcagcccacccaggtggattatgaaaaccatctg
gcccgtgaaatcctgcttcttgaggacaaaattcaaggaaaaatcaaaccgctggtggag
gatgaaagtcgtctgatcgggcgaatctcacagccggcgacgttctttattcggttgcgg
tcgtcaccagtgatctggattgatgagcctttggaagtgcgaaccgacaatgtctttgaa
gactacattttgaattcctcgatcgggcagagtttggcttcgacacctcgctgtgccgag
gaaaacgacatccttcgtgggcaggcattgcaattgtttgcccggtatcgccagtctttg
caggcaatccaccgtaagctggggggattgagaactcaggaagtcatggcagatcttgaa
aacgccgagctgcagtacctgaatcatgccgagctttcaggcaataaagtgtggatagaa
aagctgctgcaatattactacgacccgatgtatctgggctctttggaccgtcgtcacgtg
acggttctgttcaagggaacccgcatcgaggctgaaaagttcgtccacggcttgcgctga
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