Bdellovibrio bacteriovorus Tiberius: Bdt_2795
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Entry
Bdt_2795 CDS
T02356
Name
(GenBank) putative cytoplasmic protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
bbat
Bdellovibrio bacteriovorus Tiberius
Brite
KEGG Orthology (KO) [BR:
bbat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bbat03016
]
Bdt_2795
Enzymes [BR:
bbat01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
Bdt_2795
Transfer RNA biogenesis [BR:
bbat03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
Bdt_2795
Prokaryotic type
tRNA splicing ligases
Bdt_2795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
DUF4514
Motif
Other DBs
NCBI-ProteinID:
AFY02476
UniProt:
K7YRK0
LinkDB
All DBs
Position
complement(2948666..2949850)
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AA seq
394 aa
AA seq
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MPVLSNIKSAHVPVKIWSPESEVESQALKQLQNVASLPFVFKHVAAMPDVHLGIGATVGS
VIATKGAVIPAAVGVDIGCGMIAARLNVNPELVLHDLDRLRAGIERVIPLGHESNKKLTQ
EVQNWKGWKNMPESVSLLRLKDRAAHQLGSLGGGNHFIEICTDEEGAVWVMLHSGSRNVG
KSLAEEHIREAKGEIAKLAVKLPDPDLAYYLEGTTEYENYMRDLEWAQSYALENREEMLR
RVMEVISHHVGKKGAPLPYSLKVNCHHNYATREVHYGEDVLVTRKGAVRARQGDLGIIPG
SMGARSYIVRGKGSAESFDSCSHGAGRRMSRSEAKRRFSLADLQKQTAGVECRKDAGVID
EIPSAYKDIDQVMKNQTDLVDVVAVLKQVLCVKG
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgccagtcctgtcgaatatcaagtctgctcacgttccagtgaaaatctggtccccggaa
tccgaagtcgagtcacaagcactgaagcaacttcagaatgtggcgtcgttgccatttgta
ttcaaacacgtggctgcaatgcctgatgtgcatctgggaattggagccacagtcggaagc
gtgatcgccaccaagggcgcggtgatcccggcggctgtgggtgtggatattggttgcggt
atgattgccgctcgtctgaatgtgaatccggaattggtgctgcatgatctggatcgcctg
cgtgccggaattgaacgtgtgattccgttggggcatgaatccaacaaaaagctgacccag
gaagtgcaaaactggaagggctggaagaacatgcctgagtccgtttcattgttgcgctta
aaagaccgcgccgctcaccaactgggaagtctgggtggaggcaatcactttattgaaatc
tgcaccgacgaagaaggtgccgtgtgggtgatgctgcattccggttcccgcaacgttggt
aaaagtctggccgaagaacacatccgcgaagccaaaggcgaaatcgcaaagctggcggtg
aagttgcccgatccggatctggcttattaccttgaaggaaccacggaatacgaaaattac
atgcgcgatctggagtgggcacaaagttatgctctggaaaaccgcgaagagatgcttcgc
cgggtgatggaggtgatttcccatcacgtcgggaaaaaaggggcgccgctgccgtattcc
ctgaaggtcaattgtcaccacaactatgccacgcgcgaggttcattatggtgaagacgtt
ctggtcacccgcaaaggggccgtgcgcgcaaggcaaggggatctgggcatcattcccggt
tcgatgggggcccgatcttacatcgtcaggggtaagggcagtgccgaatcttttgattcc
tgttcgcacggggcgggtcggcgcatgtcacgctcggaagccaaacgtcgtttcagtctg
gcggacttgcaaaaacaaactgcgggggtggagtgtcgtaaggacgccggggtcattgat
gagattcccagcgcttacaaggacatcgaccaggtgatgaaaaatcaaacggatctggtc
gatgtggtggcggtgctaaagcaggtgctgtgcgtgaaaggctag
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