Bdellovibrio bacteriovorus Tiberius: Bdt_2887
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Entry
Bdt_2887 CDS
T02356
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bbat
Bdellovibrio bacteriovorus Tiberius
Pathway
bbat03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bbat00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Bdt_2887 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbat03021
]
Bdt_2887 (rpoA)
03400 DNA repair and recombination proteins [BR:
bbat03400
]
Bdt_2887 (rpoA)
Enzymes [BR:
bbat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Bdt_2887 (rpoA)
Transcription machinery [BR:
bbat03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Bdt_2887 (rpoA)
DNA repair and recombination proteins [BR:
bbat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Bdt_2887 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
AFY02567
UniProt:
K7ZGJ7
LinkDB
All DBs
Position
complement(3046470..3047468)
Genome browser
AA seq
332 aa
AA seq
DB search
MIKPKGFEVDRDSLRDDYAKFIIRPLERGFGVTLGNSLRRILLSSMMGSAITAVKFEGVL
HEFTTIPDVLEDVTDIILNLKEVRFKQYTADSLTLKISKKGPGKVTAADIQTTDKIEVLN
PDLPIATLGANANFNAEIVVSFGRGYVPVENRETDLPVGFIGVDALYSPIRKVNYNVSNA
RVGQRTDYDALTLEVWTDGSLKPEEAVALSSKIMKEQLQIFLTFDETMEPAEEARELGSP
TLNENLFRSVDDLELSVRSANCLKNANIRYIGELVVRSEAEMLKTKNFGRKSLNEIKEIL
GEMGLGLGMKIEGWPPAGWDPSQPPQKRETQQ
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaccaaagggatttgaggttgatcgtgattctcttcgtgatgactacgctaaa
ttcattatccgtccccttgaaagagggtttggcgttaccttgggtaactccctaagaaga
attcttcttagctccatgatgggttctgcaattacagctgttaagttcgaaggcgtattg
cacgagttcactacgatcccagatgttcttgaggacgtcactgacatcatcctgaacctc
aaagaagtgcgctttaaacagtacactgcagattctttgactttgaagatctccaaaaaa
ggtccaggcaaagtgactgcagcggacatccaaactaccgataagatcgaggttttgaac
ccagatcttccaatcgctactttgggcgcgaacgcaaacttcaacgcggaaatcgttgta
agcttcggtcgtggttatgtaccagttgaaaacagagaaactgatcttccagttggcttt
attggcgttgacgctctttacagcccaatcagaaaagtgaactacaatgtttctaatgcg
cgcgttggtcaaagaactgactacgatgcattgactcttgaagtttggacagacggttct
ttgaagccagaagaagcagtagctctttcttccaaaatcatgaaagaacaactgcaaatc
ttcctgactttcgacgagactatggagcctgcagaagaagcacgcgagcttggttctcca
actctgaacgagaacttgttccgttctgttgacgaccttgagctttctgttcgttctgcg
aactgcttgaagaacgctaacatccgctacatcggcgagttggtagtacgttctgaagca
gaaatgcttaagaccaaaaacttcggccgtaaatctttgaatgaaatcaaagagattctg
ggcgaaatgggattgggccttggcatgaagatcgaaggctggccaccggctggttgggat
ccaagtcaacctcctcaaaagagagagactcaacagtaa
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