Bdellovibrio bacteriovorus Tiberius: Bdt_3044
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Entry
Bdt_3044 CDS
T02356
Name
(GenBank) HD-hydrolase domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
bbat
Bdellovibrio bacteriovorus Tiberius
Brite
KEGG Orthology (KO) [BR:
bbat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbat03019
]
Bdt_3044
Messenger RNA biogenesis [BR:
bbat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Bdt_3044
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
DUF7146
Motif
Other DBs
NCBI-ProteinID:
AFY02719
UniProt:
K7ZBX7
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All DBs
Position
complement(3214434..3215396)
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AA seq
320 aa
AA seq
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MEKQTVQSLQDKSNVDALFLVKEKNVSVGKNGRPFMGLQLGDATGTIDARLWDRVDELAR
EFEIGDILRVKGLVQIFQHRKQLIVHRLERVEASTVDMADFIPATARNAEDMMAELTQLV
RSMKNDYLRQLVTDTLEDPEIRPMVLRAPAAKSIHHAWMGGLLEHILSICKIMDFMGTHY
SFLNRDLLLFGAIFHDIGKVWELSYDNGISYTDRGRLIGHMQIACELIDKKSSRILGFSE
ELRDICKHIILSHHGKLEYGSPKRPKFLEAMVVAMVDDFDSKVATVKTLMDNERGSGEKW
SRYSELFDRYFLLDDMNEKY
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaacaaactgtccaaagtcttcaggataaaagcaatgtcgacgctcttttcctg
gtgaaggaaaagaatgtttccgtcggtaaaaacggccgtccttttatgggtctgcaattg
ggtgatgccacgggcactatcgacgcccgtctgtgggaccgcgtggacgagctggctcgt
gaatttgaaatcggcgacattctcagagtaaaaggtctggttcagatctttcagcaccgc
aaacaactgatcgtgcatcgcctggagcgtgtggaggcttcgactgtggatatggcggat
ttcattcctgccaccgcccgcaatgccgaagacatgatggcagagctgacgcagttggtg
cgttcgatgaaaaacgattatctgcgccagttggtgacggacaccttggaagatcctgag
atccgtccgatggtgctgcgtgcaccggccgctaaaagcattcaccacgcgtggatgggt
ggattgctggagcatattctttccatctgtaaaatcatggattttatggggacacactat
tcgttcctgaatcgtgatttacttttgttcggtgcgatttttcacgatatcggtaaagtg
tgggagctgtcgtatgacaatggaatttcctacacggatcgcggccgtctgattgggcac
atgcaaatcgcctgtgagctgatagacaagaagtcctcacgtatcctgggtttttctgaa
gaactgcgtgacatctgcaagcacattatcttaagtcatcatggcaaacttgaatacgga
tcgcccaagcgtccgaagttcctggaggcgatggtggtggccatggtggatgatttcgac
agcaaggtcgccaccgtgaaaactctgatggataacgagcgcggttccggtgaaaagtgg
tcccgttatagcgaactgtttgatcgctatttcctgctcgatgatatgaacgagaaatac
tag
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