Bdellovibrio bacteriovorus Tiberius: Bdt_3260
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Entry
Bdt_3260 CDS
T02356
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bbat
Bdellovibrio bacteriovorus Tiberius
Pathway
bbat03420
Nucleotide excision repair
bbat03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bbat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Bdt_3260 (pcrA)
03430 Mismatch repair
Bdt_3260 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbat03400
]
Bdt_3260 (pcrA)
Enzymes [BR:
bbat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Bdt_3260 (pcrA)
DNA repair and recombination proteins [BR:
bbat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Bdt_3260 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
Bdt_3260 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
AAA_14
DEAD
ResIII
CpeS
Motif
Other DBs
NCBI-ProteinID:
AFY02935
UniProt:
K7Z1M6
LinkDB
All DBs
Position
3463090..3465378
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AA seq
762 aa
AA seq
DB search
MDVLDFVTKNLNPAQKDAVETLEGPLLILAGAGSGKTRVLTHRMANMIGQGVAASDEILC
VTFTNKAAKEMEHRIYKILADMGAIVHTQLWINTFHSFCVRVLRQHITLLDYKPFFGIYD
SSDQLSQIKKVMTALDINDKMYPAKNFQSRISSAKMMGLSPEGLEKSSKRLMDQKTVEVY
KAYEREMKKANSLDFDDLLLKTYDLFRMYPDVLQMYQKKFRYIMVDEYQDTNHIQYLLVQ
MLASAHRNLCVVGDEDQSIYSWRGADIKNILDFEKDFRDAKVIKLEENYRSSANIVNGAT
AVIKNNSQRKDKTLFTSNEPGDLIHVREEKNEYEEGRFVAKTIQSMINEGEGSHNDYAIF
YRTNAQSRVLEEQLRTMGIPYRLVGGVRFYERMEIKDMISYMKLSINPADDIALKRIINV
PARGIGKTTIEKIEEYAAHKNLSMFEAAEKSCDERLFNAGTTGKIRRFVDLMKDLQQNAQ
HLKLLEFFAVVLDRTEYLAALKKDESPESQARIENLEELDNAIAQFVQERGEESTLISFL
EEMALVNDVDSLNQEQNSVTMMTLHISKGLEYPYVFVVGLEENLFPSARSAESDSEEDVE
EERRLAYVGMTRARQKLWLTYAKMRRVWGQEQFNPPSRFIKEIPQNLIDFKTSAEAPRFM
ARYGSSSYDSDFGGTPKWGATSSDRNRARTQSYDDAQDFPDYDNEGSGSAPFSKGMRVRH
PTFGVGTVYATEGTGENFKVSVMFTDKTVKKFVVKYARLERV
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggatgtacttgattttgttacgaaaaatctgaaccccgcgcagaaggatgccgtcgaa
accctggaagggcctttgcttatccttgccggcgccggatctggcaaaacccgcgtcctt
acccaccgcatggccaatatgatcggccaaggggtcgcggcttccgatgaaatcctgtgt
gtgacctttaccaataaggccgccaaagagatggaacatcgtatttacaagatcctggcg
gacatgggtgccattgttcacacccagctttggatcaataccttccacagcttctgtgtt
cgcgttctgcgccagcacatcacacttctggattacaagcccttcttcggaatctatgat
tcttccgatcagctaagccagatcaagaaagtcatgaccgctctggatatcaacgacaag
atgtatccggcaaaaaacttccaaagccgtatcagcagcgccaagatgatgggcctttcc
ccggaaggtttggaaaagtcctcgaaacgtctgatggatcaaaagactgttgaagtttac
aaagcctatgagcgcgaaatgaaaaaggccaacagccttgatttcgatgatctgcttttg
aaaacctatgatctgttccgcatgtaccctgatgttctgcagatgtatcagaaaaaattc
cgctacatcatggtggacgagtatcaggataccaatcacattcagtatctgctggtgcag
atgctggcttccgctcaccgcaacctgtgcgtggtgggtgacgaggatcagtccatctac
agctggcgcggagccgacatcaaaaacatcctggattttgaaaaagacttccgcgacgcg
aaggtgatcaagcttgaggaaaattaccgatccagcgccaacatcgtaaatggcgccacg
gccgtgatcaaaaacaattcccagcgcaaagacaaaaccctgttcacctccaatgaaccc
ggcgatctgattcacgtgcgtgaggaaaagaacgaatacgaagaaggccgcttcgttgca
aagaccatccagtcgatgatcaacgaaggcgaaggctcgcacaacgactatgcgatcttc
tatcgcaccaatgcccagtcgcgtgttctggaagaacagctgcgcaccatgggtattccg
tatcgcttggttggcggcgtgcgcttctatgagcgtatggagatcaaggacatgatttcc
tacatgaagctgtccatcaaccctgcagatgatatcgccctgaagcgcatcatcaatgtt
ccagcacgcggtatcggaaaaaccacgattgaaaaaatcgaagaatacgcagctcacaaa
aacctgagcatgttcgaagcagctgaaaaatcctgcgacgagcgtctgttcaatgccggc
accaccggcaagatccgccgctttgttgatctgatgaaagaccttcagcaaaatgcccag
catttgaaactgctggaattctttgctgtggttctggatcgcaccgaatatctggcagct
ttgaaaaaagatgaatccccggaatcccaggcgcgcatcgaaaacttggaggaactggac
aacgccattgcccagttcgtgcaagagcgtggtgaagaatcgacattgatcagcttcctg
gaagaaatggctctggtgaacgacgtggattctttgaatcaggaacagaactcggtcacc
atgatgactctgcacatctccaagggtcttgaatatccttacgtgtttgttgtgggtctt
gaggaaaatcttttcccaagtgctcgcagtgcggaaagtgacagcgaagaagatgtcgag
gaagaacgccgtctggcttacgtgggcatgacccgcgctcgccagaaactgtggttgacc
tacgcgaaaatgagacgcgtgtggggccaggagcaattcaatccgccttcccgattcatc
aaggaaatcccgcagaacctgatcgactttaaaacatcggccgaagcgccgcgctttatg
gcccgctatggttccagctcttatgactctgactttggcggcacgccgaaatggggcgcc
accagctctgaccgcaatcgtgcgcgcacgcagagttacgatgatgctcaagacttcccg
gattacgacaatgaagggagcggatctgcgccattctctaaaggtatgcgcgtaagacac
ccgacatttggggtcggcactgtgtacgcaaccgaaggcaccggcgaaaacttcaaggtc
agcgtgatgttcacggataaaactgtgaagaaattcgtggtgaagtacgcccgcttggag
cgcgtgtag
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integrated database retrieval system
