Bdellovibrio bacteriovorus Tiberius: Bdt_3616
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Entry
Bdt_3616 CDS
T02356
Symbol
dnaX
Name
(GenBank) DNA polymerase III gamma and tau subunits
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bbat
Bdellovibrio bacteriovorus Tiberius
Pathway
bbat03030
DNA replication
bbat03430
Mismatch repair
bbat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bdt_3616 (dnaX)
03430 Mismatch repair
Bdt_3616 (dnaX)
03440 Homologous recombination
Bdt_3616 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbat03032
]
Bdt_3616 (dnaX)
03400 DNA repair and recombination proteins [BR:
bbat03400
]
Bdt_3616 (dnaX)
Enzymes [BR:
bbat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Bdt_3616 (dnaX)
DNA replication proteins [BR:
bbat03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Bdt_3616 (dnaX)
DNA repair and recombination proteins [BR:
bbat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Bdt_3616 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
AAA_5
RuvB_N
AAA_30
AAA_22
TIP49
AAA_16
Mg_chelatase
Rad17
AAA_14
AAA_7
AAA_19
nSTAND3
AAA_24
PIF1
AAA_2
AAA_18
Sigma54_activat
Sigma54_activ_2
AAA_28
Glyco_tranf_2_5
TsaE
Motif
Other DBs
NCBI-ProteinID:
AFY03291
UniProt:
K7YTM3
LinkDB
All DBs
Position
3824605..3826443
Genome browser
AA seq
612 aa
AA seq
DB search
MSYQVIARKWRPQSFTDVVGQNHITQTLSNALKNGRLPHALLFTGPRGTGKTSSARILAK
ALRCPNAQNFVPCNDCYSCNEIAGGSSIDVIEIDGASNNGVDAIRELRDTVAFMPSSGKY
KIYIIDEVHMLSTSAFNALLKTLEEPPSHVVFIMATTEVHKIPQTILSRCQRFDFRRIST
RSITERLQLICDREGVTADDEALWVVARQGDGSMRDSQSLLDQVITFANGPLTRASVVEI
LGLTDRALLFETLNALIDRNSQAILKVIEKIAAAGFEPHLYSQDLLEMIRNLLLIKVSEA
QASQILEMPDSELQALSEMAQRLPEEDIHMLFDMALKGGSDIPRAQDPRIVLEVTLLRMA
SAPKLVDLKTLLQGGSVPTHSAGGARPYVPPVSLPVKGHDRIEESQKVLDGPTGLEAMKA
ALNKASSAASSLKSNPAPAAKPAATAQAQTQAPVAAAAPATQAAPVVENKPKIASGSNSK
ERWVNFVELLRQDDALFAAKVENLLFVKEEGKLISLGVPVKLAFLKDQMADAQVRKKLQG
FIDSYWGAGYSFEVLMSRDQVGESAQAIQQKKVQMAEEDLRNKIIENPMVKAAQTVFKGQ
IKSIVELNKRGH
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
ttgtcttatcaggtgattgcacgcaaatggcgtccccaatcatttaccgacgttgtcggg
caaaatcatattacccaaacgctttccaatgcccttaaaaacggtcgcttgcctcacgcc
ctgcttttcacaggtccgcgtggcacaggaaaaacctcttccgctcgtattcttgctaaa
gcccttcgctgcccgaatgcccagaacttcgttccatgtaacgactgttattcgtgcaac
gaaatcgcgggcggttccagcatcgacgtgatcgaaatcgatggagcttccaacaacggt
gtggatgccatccgtgaacttcgtgacactgtggctttcatgccttccagtggaaaatac
aaaatctatatcatcgacgaagtgcacatgctttccaccagcgccttcaacgccctgttg
aagactttggaagagccgccgtcccacgtggttttcatcatggcgaccaccgaagtgcac
aaaatcccgcagacgattctgtcgcgctgtcagcgttttgatttccgccgtatctccacc
cgctcgatcaccgagcgcctgcagctgatctgtgatcgcgaaggcgtgaccgcggatgac
gaagccctgtgggtggtggctcgtcagggtgacgggtccatgcgtgactcgcaaagtttg
ctggatcaggtgatcacttttgcaaacggtcctttgacccgcgccagtgtggttgaaatc
ctgggtctgacggaccgggctttgctttttgaaactttgaatgccctgattgatcgcaac
tctcaggcgattttgaaagtgattgagaaaatcgctgcggccggttttgagccgcacttg
tattctcaggatcttttggaaatgatccgcaacctgcttctgatcaaggtgtctgaagcg
caagccagtcagattctggaaatgccggattctgaactgcaggctttgagcgaaatggct
caacgtctgccggaagaggacattcacatgctcttcgacatggctttgaagggtggttcg
gatattccgcgtgctcaggatcctcgcattgtgcttgaagtgactttgctgcgcatggct
tcggctccaaaacttgtggacctgaagacgttgttgcaaggcggatctgttcccactcac
agcgcaggtggggccaggccctacgttccgccggtaagccttccagtcaaaggacatgat
cgcatcgaagaatcccagaaggttcttgatggcccgacaggtcttgaggcgatgaaggct
gcattgaataaagcttcttctgccgcatcttctttgaaatccaacccagctcctgcggca
aagccggcagcgaccgctcaggcacagactcaggctcctgtggctgcagctgcgcctgcg
actcaagcagctccggttgttgaaaacaaaccgaaaattgcctctggttcgaattccaaa
gagcgctgggtgaactttgttgaactgcttcgtcaggacgacgctttgttcgccgcaaaa
gtggaaaatttactgtttgttaaggaagagggaaagctgatcagccttggcgttcctgtg
aaattggccttcctgaaagaccaaatggctgacgcccaagtgcgcaaaaaactacaggga
tttattgattcgtactggggtgctgggtattcttttgaggtattgatgagtcgtgatcag
gtcggcgaatccgcccaagccatccagcagaaaaaagtgcagatggccgaagaggatctg
cgcaacaagatcatcgaaaaccccatggttaaagccgctcaaaccgtgttcaagggacag
atcaagtccatcgttgaactgaacaagcgcggccactaa
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