Bacteroidetes bacterium: AEM51_03875
Help
Entry
AEM51_03875 CDS
T04336
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bbau
Bacteroidetes bacterium
Pathway
bbau03030
DNA replication
bbau03430
Mismatch repair
bbau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AEM51_03875
03430 Mismatch repair
AEM51_03875
03440 Homologous recombination
AEM51_03875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbau03032
]
AEM51_03875
03400 DNA repair and recombination proteins [BR:
bbau03400
]
AEM51_03875
Enzymes [BR:
bbau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AEM51_03875
DNA replication proteins [BR:
bbau03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AEM51_03875
DNA repair and recombination proteins [BR:
bbau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AEM51_03875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
CDC24_OB3
HHH_3
DUF3839
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AMS26287
LinkDB
All DBs
Position
874570..878148
Genome browser
AA seq
1192 aa
AA seq
DB search
MTQFSHLHVHTQFSLLDGAADIKKLYTKAIADNMPAIALTDHGNMFGAFKFVAEAYKHKG
ADGKPLVKPIVGCEFYVVADRHKRAFTKDDKDQRFHQLLLAKNEQGYKNLVKLCSLGYMQ
GLYGKYPRIDKELILQYHEGLIATTCCIGAMVPKMILRKGEEEGEKEFKWWLDLFGDDYY
VELQRHDIPDQNKVNEVLLKFAAKHNVPIIASNDSHYVDQKDANAHDILLCINTGEKQST
PSMKDFSDDDTFVKGKRFAFANDQFYFKKTAEMAALFHDIPQAVDNTNLIVDKIELLDLK
RDILLPAFPLPDGFTNQDDYLEHLTWTGAKERYKEITPEVEERLKFELHTIRTMGFAGYF
LIVSDFIAAGRNMGVFIGPGRGSAAGSVVAYCIGITNIDPIKYDLLFERFLNPDRKSMPD
IDTDFDDDGRQKVIDYVVDKYGKNQVAHIVTYGSMAAKMSIKDVARVMDLPLLESNMLAK
LVPDKPGISLDRVINAPIDGDKSLRDKEGLQSEDIDNVKKLREIHAGNDLQATVLKEALI
LEGSVRGTGIHAAGIIIAPTDLTDLIPVSTVKDINLLVTQYDGKVIEEAGVIKMDFLGLR
NLSIIRDALKLIKQNHGIEIDIDYIPLDDKATLDLFARGETNATFQFESQGMQKHMKDLK
PDRFEDLIAMNALYRPGPIAYIPNYIARKHGREPVTYDLDAMEEHLKDTYGITVYQEQVM
LLSQKLANFTKGDADVLRKAMGKKDRPTLDRLKPKFIEGAKSNGHDETILEKVWTDWEAF
AQYAFNKSHSTCYAFVAFQTGYLKAHYPAEYMSSVLTHNQSNIEKVTFFMEECKRMGLPV
LGPDVNESQVNFSVNKKGEIRFGLGAIKGVGEAAVEEIIRERDENGPFKTLFDLTSRVNL
RAVNKKTLEGLALGGGLDCFSTIHRAQFFAPEASDEPNLLEKAIRYGSNAQNNESANQQS
LFGGTQMVTLTEPTIAACEPWTLITKLAKEKEVIGMYLSGHPLDDYRIEFNYFNVTDINK
AEEFKNKDLNIAGVITDVFERMGKNNKPYGSFTLEDYSGNIRITMWSEDFLRFKHFLTNG
QMLYIKGSMRPGFRSPDQFEFKVNQIMLLAEVRERLLNKVTLTLKSDKLKNGFLQQFQSI
VQNHKGNAVLKLNIIDDAQKMGVNTVSTRFKVNFENEMVKALEEMEIEYKLN
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atgactcagttttcacacttacatgttcacacccaattttcgctgctcgatggtgcagcc
gatataaaaaaattatacacaaaagccattgctgataatatgcctgccatagcacttacc
gatcatggtaatatgtttggcgcatttaagtttgttgccgaggcatacaagcataaagga
gctgatggaaagcctcttgtaaaacccattgtaggttgcgagttttatgtggtagccgat
aggcataaaagagcctttacaaaagatgacaaggaccaacgttttcatcaattattattg
gctaaaaacgaacaagggtataaaaatttagtaaaattatgttctcttggttacatgcaa
ggactttatggaaagtatccacgtattgataaagaattgattttacaatatcatgaaggg
ttgatagcaaccacctgttgcattggggcaatggttcctaaaatgattttacgtaaagga
gaggaagaaggcgaaaaagagtttaagtggtggctcgatttatttggcgatgattattat
gtagaattacagcggcatgatattcccgatcaaaataaagtaaacgaagtattgttgaag
tttgcggccaaacacaatgtgcccattatagcgtccaatgattctcattatgtagatcaa
aaagatgctaatgcgcacgatattttattgtgcattaacacaggcgaaaaacaaagtact
cctagtatgaaggactttagtgatgatgatacttttgtaaaaggaaaacgttttgccttt
gccaacgatcagttttatttcaagaaaacagctgaaatggctgcgttgtttcatgatatt
ccgcaagctgttgataatacaaatcttattgttgataagatcgaattactggatttaaaa
cgcgatattttattgccagcattcccattacctgatggttttaccaatcaggatgattac
ctggaacatctaacttggacgggtgcaaaagaacgctacaaagaaattactcccgaggtg
gaagagcgcctaaaatttgagctgcacactattcgcaccatgggatttgccggatacttt
ttaattgtatccgactttattgccgcaggccgaaacatgggtgtgttcattggtcctggt
cgtggttcggctgctggttcggtggtggcctattgcattggcattaccaatattgatccc
atcaaatatgatctcctcttcgagcgcttcttaaatccagatcgtaagtcgatgcccgat
attgatacggattttgacgatgatggtcgccaaaaagtaattgattatgtagttgataaa
tatggaaaaaaccaagtagcccatattgtaacctatggttcgatggccgccaaaatgagt
attaaagatgtggcgcgtgtaatggatttaccattgctcgaatccaatatgttggccaag
ctagtgcctgataaaccaggtatttcactagatagggttattaatgctccaattgatgga
gataaaagtttgcgtgataaagaaggcttgcaaagcgaagatattgataacgtaaaaaag
cttcgcgaaatacacgcaggtaatgatttgcaagcaacagtattgaaagaagcactcatc
ctagaaggctcggttcgcggcacaggtatccatgctgctggtatcatcattgcaccaacc
gatttaaccgatttaattccagtatcaaccgtaaaggatattaatttattggttacccaa
tatgatggaaaggtaatagaagaagctggtgtaattaagatggactttttgggtttacgc
aatctttccattattcgcgatgcccttaagcttattaaacaaaaccatggtatagaaata
gatattgattacattccattggatgataaagcaacactggatctttttgccagaggcgaa
accaacgccacgtttcagtttgaaagtcagggaatgcaaaagcatatgaaagaccttaaa
cccgataggtttgaggatttaattgccatgaatgctttgtatcgtccggggccaattgca
tacatacccaattatattgcccgtaagcatggaagagaaccagtaacctatgatttggat
gccatggaagagcatctcaaggatacttatggcattacggtatatcaggaacaagtgatg
ttgctctcgcaaaaactcgcaaactttaccaaaggagatgcggatgtgttgcgcaaagcc
atgggtaaaaaggatcgtcctacattggatagactaaaacctaaatttatagaaggggct
aaatctaacgggcacgatgaaaccattctcgaaaaagtgtggaccgattgggaagcattt
gcacaatacgctttcaacaaatcacactctacgtgttatgcgtttgtagcctttcaaaca
gggtatttaaaagcacattacccggcagagtatatgtcaagcgtgcttacccataaccaa
agcaatattgaaaaagttacattctttatggaggaatgcaaacgaatgggtttacctgta
ttagggcctgatgtgaatgaatcgcaggttaatttctcggtaaataaaaagggtgaaatc
cgttttggattgggtgctataaaaggtgttggcgaagcagctgttgaagaaatcatccgc
gaacgcgatgaaaacggtccgttcaagacattgtttgatttgacttctcgcgtaaacctc
agagcagtgaataaaaaaacgcttgaaggtttagccttgggtggtggattagattgtttc
tcaacgattcatcgggcacaatttttcgctcccgaagcaagtgatgaacctaatttgctg
gagaaagctattcgatacgggagtaatgctcaaaataatgaatctgccaatcagcaatca
ttatttggcggaacacaaatggtaacgttaaccgaacctactattgcggcttgtgaacct
tggactctgattaccaaactcgccaaagaaaaagaagtaattggaatgtacctatctgga
cacccgttggatgactatagaattgagtttaattatttcaacgtaactgatattaataaa
gccgaagagtttaaaaacaaagatttgaacatcgcaggtgttatcaccgatgtgtttgaa
cgcatgggtaaaaacaataaaccttatggcagttttacgttggaagattattcagggaat
attcgcataaccatgtggagcgaagattttttgcggtttaaacattttctcaccaacgga
caaatgctttacattaaaggtagcatgcgccccggttttcgcagtcccgatcaatttgag
tttaaagtaaaccaaattatgctactggccgaagtaagagagcggttgctgaataaggta
acactcacgctcaagtcagataaactcaaaaatggttttttgcaacaatttcaatcaatc
gtacaaaaccataaaggaaacgcggtattaaaactaaacattattgatgatgcccaaaaa
atgggtgtgaatacggtaagtacccgttttaaagtgaatttcgaaaatgaaatggtgaaa
gcactggaggaaatggagattgagtataagcttaattaa
DBGET
integrated database retrieval system
