Bacteroidetes bacterium: AEM51_04850
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Entry
AEM51_04850 CDS
T04336
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bbau
Bacteroidetes bacterium
Pathway
bbau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AEM51_04850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbau03019
]
AEM51_04850
Enzymes [BR:
bbau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AEM51_04850
Messenger RNA biogenesis [BR:
bbau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AEM51_04850
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
CheB_methylest
Utp25_C
ERCC3_RAD25_C
MutS_I
Motif
Other DBs
NCBI-ProteinID:
AMS26449
LinkDB
All DBs
Position
complement(1123791..1125074)
Genome browser
AA seq
427 aa
AA seq
DB search
MKFSELNLIDPILKALHEEGYETPTPIQQQAIPPLLQGKDLLGCAQTGTGKTAAFAIPII
QLLYNSRETERKRKLTSTLILTPTRELAIQIGESFAAYGKYTGLKHAVIFGGVSQHGQTN
ALKYGIDILIATPGRLLDLMNQGFVDLNHIKFFVLDEADRMLDMGFVHDVKKVLTKLPRQ
RQSLFFSATMPDVITKLADTILHNPTRVEVTPVSSTADTIQQGVYFVDKGNKKLLLIDLL
KNQDMKSVLVFARTKHGCDRIARDLVKHGFKVAAIHGDKSQNARQHALSDFKAGKIRTLI
ATDIAARGIDVDNLSHVINYEMPNVPETYVHRIGRTGRAGANGVAYSFCDAEEKPYLKDI
QKLIGKALPVIEDHDYPMKDFNPTPAPKQQQERRAEGGARSNDRKRPQQANAASKDRDRK
PFRRGTR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaaattttcagaattaaacttaattgatcctatacttaaagcattgcacgaagaagga
tacgaaaccccaactcctattcagcaacaagctataccaccattattgcaaggaaaagat
ttattgggatgcgcccaaacaggcacaggaaaaacagcagcatttgctattccaattatt
caattgctttacaattcacgcgaaaccgaacggaagcgtaaattaacatcaacactcatt
ttaaccccaacccgcgagttagctattcaaattggtgaaagttttgcggcctatggtaaa
tacacaggcttaaaacatgctgttattttcggtggtgtttcacaacatgggcaaaccaat
gccttaaaatatggtattgatattttgatagctactcccggacgcttactggatttgatg
aaccagggatttgttgacctcaaccatatcaagttttttgttttggatgaagccgatcgt
atgttggatatgggatttgtgcatgatgtaaaaaaggtattaaccaaattacctcgtcag
cgccagtcattatttttctcggcaaccatgcccgatgtaattaccaaattagcagatacc
atccttcataatccaacaagagttgaagttactcctgtttcatcaacagcagataccatt
caacaaggagtgtattttgtagataaaggaaacaaaaaattgttgctcattgatttgtta
aaaaatcaagacatgaaaagtgtgttggtatttgcacgcaccaaacatggttgcgaccgc
attgctcgtgacttagtgaaacatggatttaaagtggctgccattcatggtgataaatcc
cagaatgctcgtcaacatgcactcagtgattttaaagccggaaaaattcgtacacttatt
gcaacagatatcgcagcacgtggaattgatgtagataatctttcgcatgttatcaattat
gaaatgccaaacgttcccgaaacctatgttcaccgaattggtagaactggaagagcagga
gcaaatggggttgcctactcgttttgcgatgcagaagaaaaaccgtacttaaaagacatt
caaaaattaattggtaaggccttaccggtaatagaggatcatgactatccgatgaaagac
tttaatccaacacctgcaccaaaacaacaacaagaacgaagagcagaaggtggtgcaaga
agtaatgaccgcaaaagaccgcaacaagcaaacgctgcatctaaggatagagacagaaag
ccatttagaagaggtacccgttaa
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