Bacteroidetes bacterium: AEM51_09335
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Entry
AEM51_09335 CDS
T04336
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bbau
Bacteroidetes bacterium
Pathway
bbau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AEM51_09335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbau03019
]
AEM51_09335
03400 DNA repair and recombination proteins [BR:
bbau03400
]
AEM51_09335
Enzymes [BR:
bbau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AEM51_09335
Messenger RNA biogenesis [BR:
bbau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AEM51_09335
DNA repair and recombination proteins [BR:
bbau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AEM51_09335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
Cas3-like_C_2
zf-CXXC
PseudoU_synth_2
zf_C2H2_13
Motif
Other DBs
NCBI-ProteinID:
AMS27186
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All DBs
Position
2096594..2098498
Genome browser
AA seq
634 aa
AA seq
DB search
MSIHEILKQYWGYEEFRPLQQEIIESVLSGKDTLALLPTGGGKSICFQVPAMAKDGLCIV
VSPLIALMKDQVENLKKRDIKAVAIYSGMSYREINYTLDNCIHGDIKFLYLSPERLKSDL
VRERIIQMNICLLAIDEAHCISQWGYDFRPEYLQIAEIREIIKGIPVLALTATAPPEVVK
DIQAQLKFPQPNVYVKSFTRKNIAYVVNNSEDKNQRMLHILSKVNGSGLVYVRNRRKTQE
IAYLLTKNRISADYYHAGLPHEVRNKKQEDWIKNKTRIMVCTNAFGMGIDKPDVRIVVHY
EMPESLESYYQEAGRAGRDEKKSFAVLLFNYADELEALKRLEASFPPEKEIRRVYQALCN
YYQIPIGVSVDRSFDFDIIDFVKKFNLETTVAYPALRILEQTDLVSLTESFYEPSKIKFM
MGQGLLYKFQVEHPHQDAFIKLLLRSYGGVFDQYITISEKLLAQREKQDEKTLRKQLIQL
HQLGVVDYQPQKDQPQLTFLNHRVDAETIDFRKSLLQKRKQTATIKLHAMLDYAKNSVMC
RSKKIVSYFDEFSSEDCGVCDVCLLRKKIELSNEEFIQLMNAIEEATFGKPVLLDALVKH
LTNFHQEKILETVRYLLDNDKLRYNSTQQLEWKK
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
ttgtcaatccacgaaatacttaaacaatactggggatacgaagaatttcgcccgctgcaa
caagagattattgaatcggtgttgagtggaaaagatacgcttgcgttgttaccaaccggt
ggcggaaaatctatttgttttcaggttcctgcaatggctaaagatggattgtgtattgtg
gtatcgccactcattgctttaatgaaagatcaagtagaaaatctcaaaaaaagagatatt
aaagctgttgcgatttattcgggcatgagttaccgcgaaatcaattatacacttgataat
tgtattcatggcgatattaaatttttatacctctcacccgaacgattgaaaagtgatttg
gtaagagagcgaataatacagatgaatatctgtttgttagcaattgatgaggcgcattgc
atctctcaatggggttatgattttagaccagagtatttacaaattgccgagataagagaa
ataataaaaggtattccggtgcttgcattaactgccactgcaccccccgaagtagtaaag
gacattcaggcgcaactgaaatttccgcaaccaaacgtttatgtaaaaagttttacccgt
aaaaatattgcttatgtggttaataattcggaggataaaaaccaacggatgttgcatatt
ttatctaaggtaaatggtagcggattggtatatgttcggaatcgtagaaaaacacaagaa
atagcatatctattaaccaaaaacagaatcagtgccgactattaccacgcaggtttaccg
cacgaagtacgaaacaaaaaacaagaagattggattaaaaataaaacccgaattatggtt
tgtaccaatgcttttggaatgggaatagataagcctgatgtgcgtattgtagtacattac
gaaatgcccgagtcgctcgaatcatactatcaagaagcaggaagagccggaagagatgag
aaaaaatcatttgcagtattattgtttaactacgcagatgaattggaagcattgaaacga
ttggaagccagcttcccaccagaaaaagaaattagacgagtttatcaagcattgtgcaac
tactatcaaattccaattggagtgagcgttgatagaagttttgatttcgacatcatcgac
tttgtaaaaaagtttaacctcgaaactacagttgcctacccagcattgcgtatcttagaa
caaactgatttggtttcgttaaccgaaagtttttacgaaccatccaaaataaaattcatg
atgggacaaggtttgttgtataagtttcaggtagaacatccgcatcaagatgcatttatt
aaattattgttgcgtagttacggtggggtgtttgatcaatacattaccatcagtgaaaag
ctcctcgcacaacgagagaagcaagatgaaaaaacactgcgcaaacaacttattcaattg
catcaattgggtgttgtagattaccaacctcaaaaagatcaaccccaacttacctttctc
aatcaccgtgttgatgcggaaacgatagactttcgtaaatcattattgcaaaaacgtaaa
caaacagccaccattaagctacatgcaatgttggattatgcaaagaacagtgtaatgtgt
agaagtaaaaaaatcgtttcgtactttgatgagtttagtagcgaagattgtggtgtgtgc
gatgtgtgcttgttgcgaaaaaaaatagaactctcaaacgaagaatttatacaactgatg
aacgcaattgaagaggctacattcggcaaaccagtattgctagatgctttggttaaacac
cttacaaattttcaccaagaaaaaattttagaaaccgttcgctatttgcttgataacgat
aaattgcgctacaattcaacacaacaattggagtggaaaaaataa
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