Burkholderiales bacterium YL45: A4V04_03025
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Entry
A4V04_03025 CDS
T04607
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
bbay
Burkholderiales bacterium YL45
Brite
KEGG Orthology (KO) [BR:
bbay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bbay03009
]
A4V04_03025 (rimO)
Enzymes [BR:
bbay01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
A4V04_03025 (rimO)
Ribosome biogenesis [BR:
bbay03009
]
Prokaryotic type
ribosomal protein modification factors
A4V04_03025 (rimO)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
Methyltransf_2
CLP1_P
Homeobox_KN
Motif
Other DBs
NCBI-ProteinID:
ANU65516
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Position
667994..669331
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AA seq
445 aa
AA seq
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MIRKRIPRIGFVSLGCPKNLVDSQRIVTVLRAEGYAIGSTYQDSDLVIVNTCGFIDSAVQ
ESLEAIQEALAENGKVIVTGCLGSKKTEEGNFVALRFPKLLGVTGPEETDKVLAMVHENL
PPPHEAFDSLVPGGGILLTPKHYAYLKISEGCNHHCSFCIIPSLRGKLVSRPIGSILREA
ENLVKDGVKELIVIAQDTAAYGVDVKYKLDFIGGRAVKTKINVLFEELAKLGVWVRPHYV
YPYPSADEWVGLMSEKKILPYLDVPFQHAHPRILKAMKRPGSEKNLERIEVWRKICPEIA
IRSTFITGFPGETEEEFEYLLDFLKEAKLDCVGAFAYSPIEGAAANELPGALPQEVREER
RERLMALQADISREVQKKHVGQTLKVLVDEYDEENHVAIARSEFQAPEIDGVTYIEGKPE
VKPGDMVEVVVEDSDDFDLYASLKK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgataagaaaaagaattcctcgcattggttttgtctctttaggttgccctaagaacttg
gtagacagccaaagaattgtcacggtcctccgcgctgaaggctacgctattggttccact
tatcaagattctgatttggtaatcgtcaatacttgcggctttattgattctgcggttcaa
gagtccctggaagctattcaagaggctttggcggaaaacggtaaagttatcgtcacgggc
tgcttaggcagtaagaaaaccgaagaaggcaactttgttgcgcttaggttccctaaattg
ttgggagtaacgggcccggaagaaaccgacaaagtgttggctatggttcatgaaaacctt
cctcccccgcatgaagcgtttgacagtttagttcccggcggcggaattcttttaacgccg
aagcattatgcgtatttgaaaatatcggaaggctgcaatcaccattgctctttctgcatc
atcccgtctcttcgcggaaaattagtctccagaccaatcggctctattcttcgtgaggcc
gagaatttggttaaagacggcgttaaagagttaattgtgattgctcaggatacggctgcc
tacggggttgatgtcaaatataagttggactttatcggcggaagagccgttaaaaccaaa
attaatgtgcttttcgaagagcttgccaagcttggagtttgggtaaggccgcattatgtt
tatccgtatccttccgcagatgaatgggttggcttgatgtcggaaaagaaaattcttcct
tatctggatgttccgttccagcatgcccatcctcgcatactgaaagcgatgaagagaccg
ggcagcgaaaagaacttggaaagaattgaagtatggagaaagatttgtcctgaaatagcc
attcgttctaccttcattaccggctttcctggagaaacggaagaagagttcgagtatctc
ctcgatttcttaaaagaagccaagttggattgtgtgggggcttttgcctattcaccgatt
gaaggagcagccgctaatgagttgcccggtgctttgccgcaagaagttagagaagaaaga
cgcgaaagattgatggcgcttcaagctgatatttctagagaagttcagaagaaacacgtt
ggtcagacacttaaagtcctcgtagatgaatacgatgaggaaaaccatgtggctatcgct
cgttctgagttccaagccccggaaattgacggcgttacttacattgaaggaaagccggaa
gttaaaccaggagacatggttgaagtcgttgtcgaggattcggatgatttcgacttgtac
gcatcgttgaaaaaataa
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