Burkholderiales bacterium YL45: A4V04_04890
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Entry
A4V04_04890 CDS
T04607
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bbay
Burkholderiales bacterium YL45
Pathway
bbay03030
DNA replication
bbay03410
Base excision repair
bbay03420
Nucleotide excision repair
bbay03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A4V04_04890
03410 Base excision repair
A4V04_04890
03420 Nucleotide excision repair
A4V04_04890
03440 Homologous recombination
A4V04_04890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbay03032
]
A4V04_04890
03400 DNA repair and recombination proteins [BR:
bbay03400
]
A4V04_04890
Enzymes [BR:
bbay01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A4V04_04890
DNA replication proteins [BR:
bbay03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
A4V04_04890
DNA repair and recombination proteins [BR:
bbay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
A4V04_04890
NER (nucleotide excision repair)
GGR (global genome repair) factors
A4V04_04890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
DUF4916
Motif
Other DBs
NCBI-ProteinID:
ANU65821
LinkDB
All DBs
Position
complement(1095125..1097914)
Genome browser
AA seq
929 aa
AA seq
DB search
MSKTILLIDASHFLFRAFFALPPLNTKSGHPTGATRGFLSMLRALRRDVPTDYVACVFDP
KGKTFRSDIYPDYKANREETPEDLKLQIPDVFDAVRKQGIPLIQVDGIEADDTIGTIAKS
AGEAGCKVVIATGDKDYAQLVTQDVVLINTMGAENTWLDIEGVKEKFGVPPKQIIDYLAL
MGDKIDNVPGVPKCGKKTASKWLEEYGSLENIIENAAAVKGKIGDNLRDSLAFLPVAKAL
VTIKQDADISSQVNSLEDLKIKDPDVAALKELYERLEFRAFLKDLKDESKSGPIKTDSKK
SEEDASDGLDLFSNSEEKEVQLAEFSQQTIESPDEAKHLVEEICSQSKEGKLPFLFVLAD
FKDFTYTLRGIAVGWNTGKNWFVPVSTNWVDPQGITPEEFTQIFGSWLSDPAFEKSCYDA
KYIAHVLADIGIEFNGIKEDVLLQNYVLEAHRTHYIEKLSYNWLKFELQAEEVLLGKGVK
KKTFSEVDILSCAKFAMERSYVGAHLSDLFCGLIEKDPNLQKIYREIEMPTSRVLFRMEQ
NGVLIDKQLLAKQTAELQAKASELSKKAETIAGEKFNLASPKQLGEILFEKLGVLINGKP
SKKTASGNYSTSEEVLSELALDYPLAKIALEYRALTKLISTYTEKLPTQISPRDGRVHTT
FEQAVAVTGRLSSTNPNLQNIPVRTPEGRRVREAFIAGPGKKIISADYSQIELRIMAHLS
GDKGFTEAFKKNQDIHRATAAEVFSEPLEAVTPDQRRIAKVINFGLIYSMSAFGLAKNLN
IDRHDAKNYIARYFQRYPGVSKYMEDTRQHALEKGYIQTVFGRRLEIPELQASGARKAAA
ERAAINAPMQGTAADLIKMAMIAVQDWLQEENLESKLILQVHDELILEVPDKEVEVVKKR
LPEIMSSVAELHVPLIAEVGVGENWEAAH
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacaatactattaatcgatgcatcgcactttcttttccgggctttctttgcc
ctgcctcctcttaatactaagtcagggcatccaaccggagccacgagaggctttctttcg
atgcttagggcattaagacgagatgtccctacggactatgtggcttgcgtttttgacccg
aaaggaaaaacctttcgctccgatatttatccggactataaagccaatagagaagaaacc
ccggaagatcttaagctgcaaattcccgatgtttttgatgcagttagaaaacaaggcatt
cctctgattcaagttgacggtatcgaagccgatgacactatcggaacaattgcgaagtct
gccggagaagcgggatgtaaagtagtcatagcgaccggagataaagactatgctcaactt
gtcacgcaagacgttgttttgattaatacgatgggtgccgaaaatacctggctcgatatt
gaaggggttaaggaaaaattcggggtaccaccaaaacaaattattgactacctcgcattg
atgggggacaagatcgataatgtacccggcgttccgaaatgcggtaagaaaacagcttcc
aagtggcttgaagaatatggatctttggaaaatattattgagaacgctgctgcggtaaaa
ggtaagatcggtgacaatcttcgagactctttggcctttttgcctgttgctaaagctttg
gtgacaatcaaacaggatgccgatatttcttctcaagtcaactcattggaagatctaaaa
attaaagaccctgatgttgcggctctgaaagaactttatgaacggttggaatttcgcgct
tttctcaaagatctgaaggatgagtccaagagcggtccaattaaaacagattccaagaaa
tctgaagaagacgcatcagatgggctggatcttttttccaattccgaagagaaagaggtt
caattggcagagttctcccagcaaacaattgaatctccggatgaagcaaagcatcttgtt
gaagagatttgttctcagagcaaagagggcaagcttcctttcttgtttgtgctagccgat
ttcaaagattttacatacactttgcgtgggatcgcagtcggctggaatacaggtaaaaat
tggtttgtcccggttagtacgaattgggttgatcctcaaggtattactcctgaagagttt
acgcagatattcggttcgtggctttctgatccagcttttgaaaagagttgctatgacgct
aaatacatagcacacgttttggccgacataggcatcgagttcaacggtataaaagaagac
gtcttacttcagaattatgttctggaagctcatcgaacccattacattgaaaagctttcg
tacaactggcttaagtttgagctgcaggccgaagaagtcctattgggcaaaggagttaaa
aagaaaacttttagcgaagtagatattctgtcttgtgcaaaatttgcgatggagcgttca
tacgtcggtgcacatttatctgatttattctgtgggctgatagaaaaggatccgaatctt
caaaagatataccgtgaaatcgaaatgccgacgagccgtgttttgttccgaatggaacaa
aacggtgtgttgatcgataaacagttattggctaagcagacagcggaacttcaagcaaaa
gcatccgaactttcaaagaaagcagagactattgccggagagaaatttaatttggctagt
ccgaaacaactcggagagattctttttgagaaattaggagttctcatcaatggcaaaccc
tcgaaaaagacggcttcaggaaattattctacaagcgaagaagttctttcagaacttgcg
ctggattatcctttggccaaaattgcgctggaataccgtgctctgaccaaacttatttct
acctatactgaaaagttgcctactcaaatttctcctcgagatggaagggttcatacgacc
tttgaacaggcggtggccgtcaccggaagattgtcttcgactaatccgaacttgcagaat
attcctgtaaggaccccggagggaagaagagtgagggaagcctttatcgcaggccccggg
aagaaaattatcagtgccgattactctcagatcgaattgagaatcatggctcatttatca
ggagataaaggttttaccgaagcatttaagaaaaaccaagacattcatagggcaacagct
gcggaagtattctctgaacctttggaagctgtcaccccggatcaaagaagaatagctaag
gtgattaatttcggcctgatctacagcatgagcgcattcggattggcaaagaatttaaat
attgaccgccatgatgctaagaactatattgcccgttatttccaaagatatccgggagta
tccaagtacatggaggataccagacagcatgccctggaaaaaggatatattcagacagtg
ttcggaagaagactggaaattccggaactgcaggcttccggtgcaagaaaagcagctgct
gaacgcgcagctattaatgctccgatgcagggaacagccgctgatctcatcaaaatggca
atgattgccgttcaagactggctgcaagaagaaaacttagaaagtaagctgattctccaa
gttcatgacgaattgattctggaagtgccggataaagaagtggaggttgtgaagaagaga
cttccggaaattatgtcctcagttgctgaattgcacgtaccattaattgctgaggttggt
gtgggagagaattgggaagccgcccactaa
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