Burkholderiales bacterium YL45: A4V04_04905
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Entry
A4V04_04905 CDS
T04607
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bbay
Burkholderiales bacterium YL45
Pathway
bbay03420
Nucleotide excision repair
bbay03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bbay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A4V04_04905
03430 Mismatch repair
A4V04_04905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbay03400
]
A4V04_04905
Enzymes [BR:
bbay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A4V04_04905
DNA repair and recombination proteins [BR:
bbay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A4V04_04905
MMR (mismatch excision repair)
Other MMR factors
A4V04_04905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_12
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ANU65824
LinkDB
All DBs
Position
complement(1101244..1103595)
Genome browser
AA seq
783 aa
AA seq
DB search
MSSDLIANLNEQQKAAVTLPEVSSLILAGAGSGKTSVLISRIAFLLEHRLCTPAELFAVT
FTNKAAREMMTRLQAKMPLNTRALWVGTFHGLCNRMLRLHHEAAGLPAAFAILDMSDQLG
AIKRIMKANNINEEVLPARKIQNYINKQKEEGIRAKDIKPYGFGERDLLRVYEIYEKVIN
REGAVDFGELILRTYEMLLNNEPIRQHYQDRFKFILVDEFQDTNKLQYKFLKLLAGHGEE
GRKPNAVFAVGDDDQSIYAFRGANVGNMKDFIRDFAIGEPIRLEQNYRSQGNILDAANYL
ISNNSDRLGKNLWTQSGKGDLIRVFKAGDEAEEAAFVVDNIKDFVRNGEDLREIAILYRS
NAQSRALETELTRRGVKYTVYGGLRFFDRAEIKNALAYLRLAENTADDSAFMRVVNLPAR
GIGAKTVENLIDLARDNQISLFEATQLLSGAAANKVRVFTDIINDIRSKRFSLPLTALIN
YTVQRSGLKALYEADENGAERLENLEELTSSAAAFLSQEGFEEDSKENVDNLSPLTLFLS
QATLEAGDNQAKAGEEAVQLMTIHASKGLEFNNVFITGLENGLFPHDKCLAEPKELQEER
RLMYVAITRARKKLYLTYAAQRLLHGMPRYNVKSSFLDELPGDALKWLTPKEDSDSYSSF
GSGRSGGGYYGSYNSKNSWSEDKRNSYSGYKKTYRNNENVPEWAKNIGITKEDKNKINSI
RQSSKNSDGYNIGTIVFHEKFGEGKIKNIEGQGENKKIEVAFKTSGVKNLLLAIAQKKMR
IVR
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgtctagtgatttaatagcaaatttaaatgagcagcaaaaggccgctgttactttgccg
gaggtgtcctctcttattcttgccggggcaggttccggtaagactagcgttttgatttca
agaattgctttcctcttggaacacaggctttgtactcctgctgagttatttgctgttacc
ttcacaaataaagcggcacgtgaaatgatgacccgcctccaagcaaagatgcctctaaac
actcgggcattgtgggtaggaaccttccacggtctatgcaaccgaatgctgagacttcat
catgaggccgccggcttaccggccgcatttgccatcttggacatgagcgatcagcttggg
gctatcaagaggattatgaaggccaacaacattaatgaagaagttcttcctgcccgaaag
attcaaaactatatcaataagcaaaaagaagaaggaattcgagccaaggatattaaacct
tacggcttcggcgaaagagacttgcttagagtctatgaaatttacgaaaaagtcattaat
agagaaggagccgtcgatttcggagagcttattctccgcacttacgaaatgctgctgaac
aacgaaccgattcgtcagcattatcaagacagatttaaatttattttggttgacgagttt
caagataccaataagcttcagtacaaatttctcaaactgttggctggtcacggagaagaa
ggcagaaaacctaacgccgtgttcgctgtgggtgacgatgaccagtctatttatgctttc
cgcggcgctaacgttggcaatatgaaggacttcattagagattttgccattggggagcca
atccgtttggaacaaaactaccgctctcaaggcaatattttggatgcagctaactatttg
atttcgaataatagtgatcgtcttggtaagaatctctggacacaatccgggaagggagat
cttattcgtgttttcaaggccggggatgaggcagaagaagcagcttttgtggttgacaac
atcaaagactttgttagaaacggcgaggatcttcgtgagattgccattctttaccgctct
aatgctcagtctcgtgccctcgaaacagagttgaccagacgcggggtgaaatacaccgtt
tacggtggcttacggttctttgatcgcgctgaaattaagaacgcacttgcgtatttaagg
ctggccgaaaacaccgccgacgattctgcctttatgagagtggtgaatttaccggcaaga
ggcatcggcgcaaagacagtcgaaaatctcattgatttggctcgagacaaccagatttca
ttatttgaagcaactcagttgctttccggtgcagcggctaataaggtaagagtcttcaca
gacattatcaatgacatccgttcaaagagattctctcttcctttgacggcacttattaat
tacaccgtacaaagaagcggtctcaaagcactttatgaagcggatgaaaacggagcagaa
cgcttagaaaacttggaggaattaacttcatctgccgctgcttttctgagccaagaagga
tttgaagaggactccaaggaaaacgtggataacttaagtccgctgactttgttcctttct
caagccacgctggaagccggtgacaaccaagcaaaagcaggtgaggaagctgtgcagttg
atgaccatccatgcttccaaaggtctggagtttaacaatgtgtttattaccggattggag
aacggacttttcccgcatgataagtgtctagcagaaccaaaagagcttcaagaagaaaga
agattgatgtatgtagccatcacccgcgcacgcaaaaagctgtatttgacttatgcagcc
cagagacttcttcacggtatgccccgctacaacgttaagagttcttttttagacgagctg
cctggagatgctctgaagtggctcactccgaaagaagattctgactcttattcctctttc
ggcagcggcagaagcggcgggggatactatggctcttataacagtaaaaattcttggtca
gaagataaaagaaatagctattcaggttataagaaaacatatagaaataatgaaaatgta
cctgaatgggccaagaatataggcattactaaagaagataaaaacaagattaatagtatt
cgccaaagttctaaaaactcagatggatataacattggaaccattgtttttcatgagaaa
tttggtgaaggaaagatcaaaaatatagaagggcagggagagaataagaagatcgaggtc
gctttcaaaacaagtggagttaaaaatctacttttagcaattgctcagaaaaaaatgaga
atagttagataa
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