Burkholderiales bacterium YL45: A4V04_06900
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Entry
A4V04_06900 CDS
T04607
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bbay
Burkholderiales bacterium YL45
Pathway
bbay03030
DNA replication
bbay03430
Mismatch repair
bbay03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A4V04_06900
03430 Mismatch repair
A4V04_06900
03440 Homologous recombination
A4V04_06900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbay03032
]
A4V04_06900
03400 DNA repair and recombination proteins [BR:
bbay03400
]
A4V04_06900
Enzymes [BR:
bbay01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A4V04_06900
DNA replication proteins [BR:
bbay03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A4V04_06900
DNA repair and recombination proteins [BR:
bbay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A4V04_06900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
HHH_3
tRNA_anti-codon
T2SSK
Sp-DndD
Motif
Other DBs
NCBI-ProteinID:
ANU66174
LinkDB
All DBs
Position
complement(1515986..1519447)
Genome browser
AA seq
1153 aa
AA seq
DB search
MSQDFVHLRMHSEYSFRDSTIRLKQVVHKAAAAGMKALACTDAGSIFGGVTFYKACLGQG
LKPIIGVDAWIRNPSDAHHPSKLLLLCANAHGYHTLCDLLTKAWLENQVDEKGLIEEEWL
TEENCEGLIAISGFHEGAIGRSLLNNKNFSAEEEAEKLHSIFKDRLYLELQRAGRKFDEE
LVTETIKLANKLKLPVVATHPIQFQEADGYLDHEIRCCIAQGTTLANPNRVKEYTEEQYF
KTKEEMLELFKDIPSAIENTVEIAKRCNFMMKLGKPQLPLFETPDGISLDDYMAQLSREG
LEMRLKILYPDEAKRDAERPRYIERLEREIGVIQKMGFSGYFLIVQDFIRWAKSHGCPVG
PGRGSGAGSLVAFCLEITDLDPLEFSLLFERFLNPERVSMPDFDVDFCQNNRGRVIEYVK
QKYGSDAVSQIATFGTMAAKGVIKDVGRVLDFPYNQCDLLTRHIPSNPGQQVSLEQAIES
EPEFKAIISNSPELKPLVASAIKLEGLCRNIGIHAGGVLIAPGKLTDFCPLYAADMLPEN
VISMYDKKGVEEVGLVKFDFLGLTTLTIVARALDYIEKNTGKRPDIEHLQPTDKKVYDKI
FKPADTAMVFQFESPGMRDIMVRSVPTKLSDLIALNALYRPGPMALADDFIELRKGGEKK
PEYADDRLIPVLEETVGIMIYQEQVMQVAQIIAGYSLGGADILRRAMGKKDATEMERQSK
IFLEGAVKNGVKEEVAEELFNKMRKFAEYGFNKSHAAAYSYVAYQTAWLKCYYPAEFIAA
NLCEVMLNSTKLFDYIADAQRHGIKVLPVDINASEFYFTAPDSKTIRFGMGALKGMGEAP
ANAIVEERTKNGPFKDMEDLVNRLGTKVMSRKVLEVLSTIGAFDSIDPNRRMWLENVPQI
YRSAQENEENADQMGLFGEESSEMSTELIQFKPWDTLERMKKEKSIIGFFFTGSPMDACR
EEIKDHFGGLTIKECPLDTQTKFSNFKGFGVVSSINFGVSKTGNHFCKLNIDDGLHRYEM
RTSQELYEFCKKEVSVDEVYMVEGTVVYNDQSNVFSWNLKSMRPISEIRASHGAKLQLVL
DKKGKMSELKALIEELSVHPSSLRTAPIEIKVREGDTEVCIPLPANFSALLSGANLSKVE
NSDLIKQAKINYK
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagatttcgttcatctgcgcatgcattcggagtattcctttcgcgacagtacc
attcgcctgaaacaggtggtacataaagcggcggccgcaggaatgaaggctttagcatgt
acggatgccggatcaattttcggcggcgttaccttttataaggcttgtctggggcaaggt
ttaaaaccaattatcggtgtagatgcttggataaggaacccatcggacgctcatcatccg
tccaaacttcttcttctatgtgcaaatgcgcacggttatcataccctttgtgacttgctg
acaaaagcttggttggaaaatcaggttgacgaaaaagggctgattgaagaagaatggctg
acggaagaaaactgcgaagggcttattgctatttccggatttcacgaaggtgcaatcgga
cgttctttgctaaataataaaaatttctctgcagaagaagaagctgaaaaacttcactct
attttcaaagaccggctttatcttgaacttcaaagagcagggagaaagtttgatgaggag
ttagtcactgagacgattaaactggcaaataagctaaagcttcccgtggtcgccacgcat
ccaattcagttccaagaagcagacggatatctcgatcacgagatccgttgttgcatcgcc
cagggaacaacgctggctaatcctaatcgagtaaaagaatatacggaagagcagtatttc
aagacaaaagaagaaatgctggagctctttaaagacatccccagtgcgattgaaaatacc
gttgaaatagccaaacgctgcaatttcatgatgaaactcggtaagcctcagcttccgttg
ttcgaaacgcctgacggaatttctttagacgactatatggcgcagctttccagagaaggc
ctggaaatgcgcttgaagattctttatccggatgaggctaagagagacgctgaaagacct
agatatattgagcgcttagaaagagaaatcggcgttattcaaaagatgggtttttccggc
tacttccttatcgttcaggactttatccgttgggctaaaagtcacggctgtccggtcggt
ccgggccgcggatccggagctggatctctggttgctttttgcttggaaattacggacttg
gatcctctcgaattcagtttgctgtttgagcgattcttgaatcctgaacgcgtctccatg
cctgactttgacgtggacttttgccagaataaccgcggccgagtaattgaatatgtaaaa
cagaaatacgggtctgatgcggtaagtcagatcgcgacattcggtactatggcggcaaaa
ggtgttatcaaggatgtcggccgtgtgcttgactttccctataaccaatgcgacttgctg
acacgtcatattccttctaatcccgggcagcaagtttctttggaacaggctattgaaagt
gaacctgaattcaaagccattattagcaactctcccgagctaaaacctttagtagcttct
gccattaagctcgagggcttgtgccgaaatatcggtattcatgccggtggcgtgctgatt
gctccgggaaaactcaccgacttctgtcctctttatgcggccgacatgcttccggaaaac
gtcatcagtatgtatgacaaaaagggcgtggaagaagtcggtctggttaaatttgacttc
cttggtttgactactcttaccatcgtggcaagagcattggattacatcgaaaaaaatacg
ggcaaacgtcctgatatcgaacatttgcagccgacggataagaaggtttacgacaaaatc
tttaagcctgcggataccgcaatggtattccagtttgaatcaccgggtatgcgtgacatt
atggtccgttccgtcccgactaagctttctgaccttatcgctctgaatgccctttatcgc
ccgggtccgatggctttggcagatgactttattgagctcagaaaaggcggcgagaagaag
ccggagtatgcagatgaccgactgattcctgttttggaagaaacggtcggaatcatgatt
tatcaggaacaggtgatgcaggtcgcgcagattatcgccggctattcacttggcggtgct
gatattcttcgccgtgccatgggtaagaaagacgctacggaaatggaacggcagtctaag
attttcttggaaggagccgtaaagaacggggtaaaagaagaagttgccgaagagctcttc
aataagatgaggaagttcgcggaatacggtttcaacaagtctcacgctgctgcttactct
tacgtggcttatcaaaccgcgtggcttaaatgttattacccggcggaatttatcgcagct
aacctttgtgaagtcatgttgaactccacgaagttatttgattacattgcagatgctcag
cgtcatggaataaaggttctgccggtcgatattaatgcaagcgagttttacttcaccgct
cccgattccaagactatccgctttggcatgggggcattaaaaggcatgggcgaggctccg
gccaatgcgattgtggaagagagaaccaagaacggtcctttcaaagacatggaagatctg
gtcaaccgattggggactaaagttatgtctcgaaaggttttggaagttctgagcacgatt
ggtgcgttcgactcaatcgatccgaaccgcagaatgtggctggaaaacgttccgcagatt
tatcggtcggctcaagaaaatgaagaaaatgccgatcagatgggtttattcggggaagaa
agttctgagatgagcactgagttgattcagttcaagccctgggacactctcgaaagaatg
aaaaaagaaaagagcatcattgggttcttctttaccggctctccgatggatgcctgcagg
gaagaaatcaaagatcatttcggcggtctgaccattaaagaatgtcctctggatactcag
accaagttcagtaactttaaaggcttcggtgtagtttccagcatcaatttcggtgttagt
aagaccggcaaccacttctgtaaattaaatatcgatgatggattgcatcgttacgaaatg
agaacttcgcaagaactctatgaattctgcaagaaagaggtttcagtcgatgaagtgtat
atggtcgaaggaacggtcgtctacaacgatcaatcaaatgtcttctcttggaatctgaaa
tccatgcgaccgattagtgaaatcagagcctctcacggagcaaagctgcagctggtttta
gataaaaagggaaagatgagcgagttaaaagcattgattgaagaactttccgttcatccg
tcttccttgagaactgctccgattgaaattaaagtaagagaaggtgacacggaagtctgc
attccgttgccggccaacttctctgcgctattatcaggagcgaacctttcaaaagttgaa
aactcggatttgataaaacaggcgaagattaactataagtag
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