Burkholderiales bacterium YL45: A4V04_07195
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Entry
A4V04_07195 CDS
T04607
Name
(GenBank) ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bbay
Burkholderiales bacterium YL45
Pathway
bbay03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbay00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A4V04_07195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbay03019
]
A4V04_07195
Enzymes [BR:
bbay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A4V04_07195
Messenger RNA biogenesis [BR:
bbay03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A4V04_07195
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ANU66227
LinkDB
All DBs
Position
complement(1586051..1587427)
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AA seq
458 aa
AA seq
DB search
MSEQTGFKDFGLDEKLLKAVEKVGYTTPTPIQIKAIPVVLEGKDVMGAAQTGTGKTASFG
LPILQNLLKYENASVSPARHPVRALILTPTRELALQVAENLEQYASETKLRVACVYGGVD
IKPQSIELRKGIEVLIATPGRLLDHLEQRNTSLKNVEIVILDEADRMLDMGFLPDITKIL
KELPPKRQGLMFSATFSPEIKKLGQSFLNEPVMIEVARQNTTASTITQELYEVPDGKKTD
SLVEILTTKGVDDQGNTLQAIIFVNSKLMAGRLSRQLNRYGFLADAIHGDKSQEERTKTL
GAFKDGTINYLVATDVAARGLDIPDMPLVINFDIPFMAEDYVHRIGRTGRAGAKGLAISL
MTSEDENNVEAIEKLTKKKFNRIDLSPKKIKFDYVNPNKKYTYQKVKQDVDPFFLNPYVP
SKTVSQKPVAKTVAIVESIHEHKPKLVAALLGGTGRRG
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagcaaactggatttaaagatttcggtttagatgaaaagttattaaaagcggta
gaaaaagtcggctacacaacaccgacacctattcaaatcaaggccattccggttgtcttg
gaaggaaaagatgttatgggggctgctcagaccggcaccggtaaaacagctagcttcgga
cttccgattcttcaaaatttgctcaaatacgaaaatgccagcgtctctccggcgcgccat
ccggtacgggctcttattctgacgccgacgagagaattggctctgcaggtcgctgaaaac
ctcgaacaatacgcttctgaaacgaaacttcgagtcgcttgcgtctacggcggcgtggat
attaagccgcaatccatagagttaagaaaaggcattgaagtattgattgccacacccgga
cgcttgctcgatcatctggaacaaagaaatacttctctaaagaatgttgaaatagtgatc
ctcgatgaagcagatcgcatgctggatatgggctttcttccggatatcacaaaaatcctg
aaagagcttcctccgaaacgtcagggtttgatgttctccgcgacattctctcctgaaatt
aaaaaacttggacagagtttcttaaatgaaccggtcatgattgaagttgccagacaaaac
acgacggcttcaaccatcacccaggaactttatgaggttcctgatggcaagaaaacagat
tctcttgtcgaaattctcacgacaaaaggagtcgatgaccaaggaaatactttgcaggca
attatctttgttaattccaaactaatggccggtcgcctttcaaggcagctgaacagatac
ggtttcttggctgatgccattcatggagataaatctcaggaagaaagaactaaaaccttg
ggagcatttaaagacggcactatcaattatttggttgctacggatgtggctgcacgcggc
cttgatattccggatatgccgttggttatcaattttgatattcctttcatggccgaagat
tatgttcaccgaatcggcagaaccggccgtgccggtgctaaaggattggcgatcagcttg
atgacttccgaagatgaaaacaatgttgaggctatcgagaagttaaccaaaaagaaattc
aatcgaattgacctatctccgaagaagatcaaattcgattatgtaaatcctaataagaag
tacacctatcagaaagtaaaacaagacgtcgatccgttcttcttgaatccttatgtcccg
tctaaaacagtttcccaaaagcctgtcgctaaaacggtcgctattgttgaatcaattcac
gagcacaaaccgaaactagtcgcagctcttctcggaggaacgggcagaagaggttag
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