Burkholderiales bacterium YL45: A4V04_10195
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Entry
A4V04_10195 CDS
T04607
Name
(GenBank) heavy metal transporter
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bbay
Burkholderiales bacterium YL45
Pathway
bbay03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbay00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A4V04_10195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbay03019
]
A4V04_10195
03009 Ribosome biogenesis [BR:
bbay03009
]
A4V04_10195
Enzymes [BR:
bbay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A4V04_10195
Messenger RNA biogenesis [BR:
bbay03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A4V04_10195
Ribosome biogenesis [BR:
bbay03009
]
Prokaryotic type
rRNA helicases
A4V04_10195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
B12-binding
Cas3-like_C_2
UTP25_NTPase-like
Motif
Other DBs
NCBI-ProteinID:
ARE60876
LinkDB
All DBs
Position
2287950..2289686
Genome browser
AA seq
578 aa
AA seq
DB search
MSENLFMKLGLDEKLASALSRLGFEEPTPIQTHSIPALLEGRDVLGQAATGTGKTAAFSL
PLIQRYCLNSESKNPKVLILTPTRELCIQVSEAILSYSRDSGVYVTPIYGGQDYSRQIKA
LNRGVHIVVATPGRALDHIRRGTLRLQDIQAVVLDEADEMLDMGFAEDLDAILSTLPEER
QTALFSATLPARITKMAENQLNNPYRILIPKEKVPEGEQPKVRQSAYIVGRNHRVAALGR
ILDIESPRLAIVFARTRNEVDELAESLRGRGYSVEPLHGGLDQAQRDRVMKRARAEQVDV
IVATDVAARGIDIEHLTHVINYGIPATTETYVHRIGRTGRAGREGTAITILEPRESRLLK
NIERMTKQKIQILSVPTATDVHAKRLDLTRASVHEILVGENDLGRYRSIVETLSNDFDVL
DVAAAAVKLANENNWKDSYDVEIPSQIGVKEEGRKPRKPSKSPRRTSEGMVRLFIGTGRD
SGIRPQDLVGAIANEAGVSSKLIGSIDIADRYSLVEVDEEIAQNVIFALRSAYIKGKQCV
VRYDRPPEERGFLDAEEPVVRKRAKRTADKDKKKGKSK
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaatctattcatgaaactcggccttgacgaaaagctggccagcgctttatca
aggttgggttttgaagaaccgactccaatccaaacacattctatcccagcccttcttgaa
ggacgagacgtcttaggtcaagcagccactggtactggtaaaacagccgcgttctctctg
ccgttgattcaaagatactgtttgaacagtgagtcaaagaatccgaaagtattgattttg
accccgacacgtgaattgtgtattcaagtctctgaagctattctcagttacagcagagac
tccggtgtttatgtaacaccgatttacggcggtcaggattacagtcgtcagatcaaagcc
cttaacagaggcgttcacattgttgttgcaacaccgggcagagccttagatcacattcgc
agaggtaccctccgtcttcaagacattcaagccgttgttctcgacgaagctgacgaaatg
cttgacatgggatttgcagaagatctggatgcaattctcagtacacttcctgaagaaaga
caaacagctttattctcagctacattgcctgccagaattacaaagatggctgaaaatcag
ctgaacaatccgtaccgcattcttatcccgaaggaaaaggttcccgaaggagaacaacct
aaagtcagacagtctgcctatatcgtcggcagaaaccacagagttgctgctttaggcaga
atcttagatattgaaagccctaggctggctatcgtctttgcccgtacaagaaacgaagtt
gatgaactggccgaaagcctgagaggtagaggctacagcgtagaaccattgcacggcggc
ttggatcaggcccaaagagaccgtgtcatgaagagagccagagcagaacaagtcgacgtt
attgttgcaactgacgttgctgcccgcggtatcgatatcgaacacttaactcacgttatc
aactacggtattccggccacaactgaaacctacgttcatcgtatcggccgcacaggccgt
gccggacgtgaaggtacagccatcacaattctggaaccgagagaaagcagattgcttaag
aacattgagcgcatgacaaaacagaagatccaaattctttctgttccgacagcaactgat
gttcacgctaaacgcctggatctcacaagagcctccgttcatgaaattttggtcggcgaa
aacgatttgggacgctatcgttctattgttgaaactctcagcaatgacttcgacgtcttg
gatgttgcagccgctgccgtcaaactggccaacgaaaacaactggaaggattcctacgac
gttgaaatcccgagccagattggcgttaaggaagaaggccgtaagccaagaaaaccgtct
aagtctccgcgccgtacatctgaaggaatggttcgtctgttcatcggtaccggcagagat
tccggcatcagaccgcaggatttggtcggcgccattgctaacgaagctggtgtttcttcc
aagctgattggttctattgatattgctgaccgctactcacttgtagaagttgacgaagaa
atcgctcagaacgttatttttgcattacgcagtgcttacatcaaaggaaaacaatgtgta
gtgcggtatgatcgtccgcctgaagaaagaggtttcttagacgcagaagaacctgttgtt
cgtaaaagagcaaagagaactgccgataaggacaagaaaaaaggaaagagcaagtaa
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