Burkholderiales bacterium YL45: A4V04_10650
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Entry
A4V04_10650 CDS
T04607
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
bbay
Burkholderiales bacterium YL45
Pathway
bbay03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A4V04_10650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbay03400
]
A4V04_10650
Enzymes [BR:
bbay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A4V04_10650
DNA repair and recombination proteins [BR:
bbay03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A4V04_10650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
AAA_30
ADDB_N
Zn_ribbon_6
Zn_ribbon_3
T2SSE
Sortase
AAA_11
SWI2_SNF2
PyrI_C
AAA_22
DZR
Motif
Other DBs
NCBI-ProteinID:
ANU66828
LinkDB
All DBs
Position
2380206..2382215
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AA seq
669 aa
AA seq
DB search
MDQKIIKVIVDTPLWEPLDYLNVPAENLKVGERCLVPVGRRTCVGIVVGFSQTSSFPQDR
LKKIIGRIDRLSPLSSNWLRFTKFASKYYLSPWGETAVPSLPKFFRRPPGQRHDSSLNRL
RKTNFVLSAPDQELPVLNEEQKYVLDNFVQSKFGVSLLYGITGSGKTEVYLRLIQKVFDK
DPEAQILLMVPEINLTPQLVERVAKRFPNHAVGSWNSKMSEGEKAATWLAAHEGRLNILV
GTRLSVFASLPKLSMILIDEEHDSSYKALEGVRYSSRDLAIKRAQIENIPILLGSATPSF
ESFQRALSGDYQLFKMTKRAVQDAHLPELELIDISKDRVKGAALGAQVRDEITKTLEKKE
QVLIFLNRRGYAPVVTCNSCGWVSTCPHCSTFAVYHKTTGNLTCHYCGWTTPLPRHCPKC
GSVEIVPLGRGTQRVEEEIKELWPDANVMRLDQDSTRRKGSAQEVLESVHQGKVDILLGT
QIVAKGHDFKKVSLVVILNSDPVLLSPDFRARERLFSVLMQVSGRAGRGEIPGKVLLQTQ
YTQDPLFHHLSRQNYSDFATEELNSREKTRLPPFTAQALVIAEGKKINEVLKYLDEVKQA
ALSLQYPGIHIYSPIPQSIMRIQDIERGQLLLEADSKKVMQEFLAVFAPILFEKMNRFNV
YIDVDPLNC
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggatcagaagataatcaaagtaatcgtcgatactcctttatgggagcctctcgattat
ttgaatgtgcctgctgagaatctaaaagtcggcgagagatgtcttgttcccgttgggaga
cgaacttgtgtgggtattgtcgttggcttttctcaaaccagcagttttccgcaagaccgg
ctgaaaaagattatcggacgaattgaccgtctgtctcctcttagctctaactggcttcgg
tttactaaatttgcctcgaaatattatctttctccgtggggagaaactgcggttccctca
ttgccgaagttttttcgaagacctcccggtcagcggcatgattcttccttgaacagactt
agaaaaaccaactttgtacttagcgcaccggatcaagaacttccggttctgaatgaagag
caaaagtatgttctggataattttgttcaaagcaagttcggggtaagtttgctttacggt
attaccgggagcggtaagacggaagtctatcttcggcttatccaaaaagtttttgataaa
gatccggaagcacagattctgctgatggtgccggaaatcaatttaacgccacaacttgtg
gagagagtagccaaaagatttccaaaccatgctgtcggcagctggaactctaaaatgtcg
gaaggagaaaaggcagctacttggcttgcagctcatgaaggccgactgaatattttggtt
ggtactcgtctttccgtttttgccagtctgcctaagctttccatgattctcattgatgag
gagcatgacagctcttataaggcactcgaaggggttcgttattcttcccgagatttggcc
attaaaagggcacagatcgagaacattccgattctcttaggttctgctaccccatctttt
gaatcgttccaaagagctcttagcggcgattatcagctcttcaaaatgactaagagagcc
gttcaggatgctcatcttccggaattggaacttatcgacatctccaaagacagagtaaaa
ggtgcggctctaggtgctcaggtaagagatgagattactaaaacccttgaaaagaaagag
caggttttgattttcctcaaccgcagaggttatgcaccggtggtgacatgcaacagctgc
ggatgggtttcaacttgtcctcactgttcaacgtttgcggtttatcacaagacaaccgga
aacttgacctgtcactactgcggatggactacgcctcttccgaggcactgtcctaaatgt
gggtccgttgaaattgtgccgctaggccgcggaacgcagagagtcgaagaagagattaaa
gagctttggcctgacgcaaacgtgatgcgcttagaccaagacagcacaagacgcaaagga
agcgctcaggaagtactggaaagcgtccaccaaggaaaagtcgatatacttctcggaact
cagattgtggccaaaggacacgattttaagaaggtttctttggttgtcattcttaattcc
gatccggtgttattgtcgccggactttagggcaagagaaagacttttttccgtactgatg
caagtttccggcagagccggaaggggagagatacctggaaaggttttattgcagacgcag
tacacgcaagatcctcttttccaccatttaagccggcagaactacagtgactttgcgacg
gaggaactcaattcaagggagaagacgagactgcctccgtttaccgcacaggctttggtt
attgcggaaggaaaaaagattaacgaggtactcaagtaccttgatgaggtaaaacaagcg
gcgctttctctccaatatccgggaattcacatttattctccgattccacagtcgattatg
aggattcaggatattgaaagagggcaacttctgcttgaggctgatagtaagaaagtcatg
caggagtttttagctgtgtttgctcctatattgtttgaaaaaatgaataggttcaacgtt
tatatcgacgttgatccgcttaactgttga
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