Burkholderiales bacterium YL45: A4V04_13025
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Entry
A4V04_13025 CDS
T04607
Name
(GenBank) hypothetical protein
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
bbay
Burkholderiales bacterium YL45
Pathway
bbay03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A4V04_13025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbay03400
]
A4V04_13025
Enzymes [BR:
bbay01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
A4V04_13025
DNA repair and recombination proteins [BR:
bbay03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A4V04_13025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
Motif
Other DBs
NCBI-ProteinID:
ANU67250
LinkDB
All DBs
Position
complement(2898146..2901706)
Genome browser
AA seq
1186 aa
AA seq
DB search
MIHTIYCNVYEGLEAALAENVFQDLEAMAGDPSRIFEKIEIIPASSAIEDRLARSLADKF
SILPGIRFCSIFDWLKPFMGATFRPGSIGTSLDWQIWNILKNPKFFEELKAVVPETSYAR
LETFLHRNAEPELRNINLIEFCYQMSRLYATYGSFRMDWLLNWIDEKSFPLPADKALAMK
EQPDYYWQKNLWERVAKAGKTKDLHNLLKIKDTLQHFHFEPKDKGKSLHFFMPFSLPPIL
LPFLKAFAEDKNAPQLWLYIMNPCAEYWFESMPIELFDWSSKEDWDEKAQKFLTANSPST
RAMIDRLYRFLNVDNGEVIETDAIEEQEVPKPTKPAIKRNRARIEDLSKKFDPLSPELKL
FTSEDVQAYYFQQPQDSYLHKFQNSILFMDSSKLPTEADPSDESLKVFKAPSFPREIEGV
IDWIHYRLSSENKDGEKKLNLSDIAVIVPDIEKATPAIEAVMGALPNNLRLPYKIIGNSI
ADTYLSLAAILGFGKLLNSRFNAADLEEWLELPINLERWDLSLSDISVLSTWLKAAGFRF
GLSQEHLKDLNLDASDGTLDQAVERLTMGYFINPIEKNTFGDVLPVFGDEKGGFDLVTDG
RGKLFKTIVALSESLEETRKELFKDGGLKTPQEWHEIISGWLNQYFVTNETPQEILSFRS
SLQRLSGAMQEGLEEGTKVPFSVIWNVIETHLRNTPSLAQPTGSITFSSVQELRGLPFKV
IALCGFDENSGFPGSSSHQEFDLMGVDQLKRRADRDSREDNKARFLDILLAARKNLVISY
TVGTDPVTETNPSSVVQNFKNYFLSNALTGENGKDKAKKLWESVEVKLPLNSFSEKNFKK
TSSRPWLSPDSSMLQSILKARSANYSLPLPAIGGTPIPDTSLGLSIVHKGSLSASELIKF
LSNPDKYVLKKHKLDIYSGQEEEEFSWLAPNDALSLTLRKRKYLRELEEGYSDDELTRQR
SLDPLNGIKDVRLSSTNDAWSNAELVHAKKLEKIKKFKLFSVTEGIILKFDKPSCRITQV
TDSPLEVYTDHQNRYVIFDDNSSASQTDRLELRANIWTAAKKPTMVMSLVADPRTEAAQE
DYFLLALDHLPDVIFEENKEDVKQMVRLFDLSRRFSLGLTQEKTQTLLWTGFDHTAACAC
SKPIWAKLFPNSKNSKKTATDVGRPLEEDIDELQQVIESQILKEGR
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgattcacacgatttactgcaatgtttacgaagggttagaagccgctttggcagaaaac
gtctttcaagacttagaagcaatggctggagatccatctcgcatattcgagaaaattgaa
attatcccggcttcgtcggccattgaagacagactcgctcgcagtcttgcagataaattt
tctattcttccgggaatcagattttgctcaatttttgattggctgaaacctttcatgggt
gcaaccttccgtcccggctccatcggcacttcgttggactggcagatttggaatatcctc
aaaaacccaaaattctttgaagaattaaaagcagtagttccggagacctcctatgcgcgg
cttgagacctttcttcaccgtaacgccgaacctgaactccgaaacattaatctgattgaa
ttttgttatcaaatgagccggctttatgccacctatggctcattccgcatggactggtta
ttaaattggattgatgagaagtcttttcctctgcccgcagacaaagccctcgccatgaag
gaacaacctgactattactggcagaaaaatctctgggagagagtcgccaaggctggaaag
acaaaagatcttcacaacctgttaaaaataaaagatactctgcagcacttccatttcgaa
ccgaaagacaaagggaaatcgcttcatttcttcatgccgttttctctgcctccgatactt
ctgcctttcttgaaagcttttgcggaagacaaaaatgctcctcagctctggctttacata
atgaacccttgtgcggagtattggtttgagtccatgccgatagaactgttcgactggagc
agcaaagaggattgggatgaaaaagctcagaagtttcttactgccaacagtccgtctacc
cgagcgatgatcgatcgtttgtatcgcttcctgaatgtggataacggagaagtcattgag
acggatgctatcgaggagcaagaggttcctaaaccgactaaaccggcgattaaacgaaac
cgggcaagaatcgaagacttaagcaaaaaatttgatcccctctcgcccgaattaaaactc
ttcacttccgaagatgttcaggcctactatttccagcaaccgcaggacagttatctgcac
aaattccagaactccattctatttatggactcctcaaagctgccgacagaagcagatcct
tctgatgagtctttaaaggtatttaaagctccctcttttccacgagaaattgaaggagta
atcgattggattcattatcggttatcgtccgaaaataaagacggcgagaaaaagctcaac
ctctccgacattgccgttattgttccggacattgaaaaggcaacacctgctattgaagct
gtaatgggagcattgcccaacaaccttcgactgccttataagattatcggcaattccatt
gcagatacttacctctctctggcagctatcttagggtttgggaaattattaaactcccga
ttcaatgctgcagatttagaagaatggcttgaactgccgattaacttagaaagatgggat
ctttctctctcagacatttccgttttatctacctggctcaaggcagccggattccgcttc
ggcttatctcaggagcatttaaaagatttaaatctggatgcatccgacggaacattagat
caggccgtcgagcgtctgaccatgggctatttcattaaccctattgagaaaaatactttc
ggagatgttcttcctgtatttggagatgagaaaggcggttttgacttagtcacagatggt
cgcggcaagctcttcaaaacgattgtagctttgtccgaatctttagaagagacaagaaaa
gaattattcaaggacggcggtttaaagacgcctcaagaatggcatgaaatcatttccggt
tggctgaatcagtatttcgtcacaaatgaaaccccgcaggaaattctcagcttccgaagc
agtctacaaagattatcaggcgctatgcaggaaggcctcgaggaagggacaaaagttcct
ttttccgttatctggaacgttatcgaaactcatctgagaaacactccaagtcttgctcaa
cccactggttccattaccttctcgtctgtacaggaattaagagggttgccttttaaagtt
atcgcactttgcggctttgatgaaaacagcggtttcccgggcagttcttcccatcaagag
ttcgacctcatgggagtagaccagctcaagagaagagccgacagagacagccgagaggac
aataaagcaagatttttggatattcttttagccgcgagaaagaatttagttatttcttat
acggttggaacagatccggtgacggagacgaatccttcgagcgttgttcaaaatttcaag
aactacttcttatcgaacgctctcaccggagagaacggaaaggacaaagcgaaaaaacta
tgggagtctgttgaagtcaaacttcctctgaattccttctctgaaaaaaattttaagaag
acttcttcacgcccttggctcagtccagactcctcaatgctccaatccattttgaaagca
aggagcgccaattactctttacctcttccggctatcggaggaactcctattcccgatacc
agtctaggtctatctatcgttcataaagggagcttatcggcctccgagcttattaagttc
ctctctaatccagataagtatgtgttgaagaaacacaagctggatatttattcgggacaa
gaagaagaggaattttcctggcttgccccgaatgacgcgttatctcttaccctaaggaag
cggaagtacttgagagaattagaagaaggttatagtgatgatgaactgactcgtcagcgt
tcattagatccgttaaacggaattaaagatgttcgtctttcaagtacaaacgatgcgtgg
agcaatgcagaacttgttcatgccaaaaaacttgaaaaaataaaaaaattcaaactcttt
tcagttaccgagggaattatccttaaatttgataaaccttcttgcagaatcacgcaggtt
acggattctcctctagaggtctatacagatcaccaaaatagatatgtaatttttgatgac
aattcttcagccagccaaactgacaggctggaacttcgtgcgaatatctggacagctgca
aagaaaccaaccatggtgatgagtttagtcgcggatccgagaacagaagcagcgcaggaa
gactattttcttttagctctcgatcaccttccagatgtaattttcgaagaaaataaagaa
gatgttaagcaaatggtgcgtctctttgatctttcaagacgtttttctctcggactgaca
caagaaaaaacacagactctcttatggacaggatttgatcatactgcggcctgcgcgtgc
tcaaaacctatttgggcgaaactatttcctaattccaaaaattccaagaaaacggcaacg
gacgttggccgccctcttgaggaagacattgatgaacttcaacaggtcatcgaatctcag
attttgaaggaaggaagatga
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