Bifidobacterium animalis subsp. lactis BB-12: BIF_00092
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Entry
BIF_00092 CDS
T01840
Name
(GenBank) glycoside hydrolase family 43 protein
KO
K01198
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
bbb
Bifidobacterium animalis subsp. lactis BB-12
Pathway
bbb00520
Amino sugar and nucleotide sugar metabolism
bbb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bbb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
BIF_00092
Enzymes [BR:
bbb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
BIF_00092
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_43
GH43_C2
DUF1349
Motif
Other DBs
NCBI-ProteinID:
ADC85541
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Position
612626..614251
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AA seq
541 aa
AA seq
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MKIENPVLPGFNADPSMIRVGDTYYIANSTFEWWPGVRLHESKDMVHWRLLPSPLNRRSQ
IDMRGNPSSGGVWAPDLSYADGKFWLVYSDVKIVNGAFKDCTNYLVTAEDIRGPWSEPIR
INGVGFDASLFHDDDGRKYLVQQTWDFREYNHPFDGITLTEFDVETMRLRPETERTIWRG
TDVKLVEGPHLYKINGMYYLFCAEGGTVWTHQEVVARSSTLDAMSFEGSPYDPFISNFDT
PRSYLQKQGHGALVDTPSGEWYYASLCARPWHHENESVTDPRGWCTLGRETSIQKVEWTD
DGWPVVVGGHGGQRVVEAPQDAIETEAPADHSQHDDFEASQLALDWNTLRVPFDESMGSV
GGGTLTLRGQGSLCNLFDLSLVARRWQAFDFDASVGVRFDPTNYRQMAGLTNYYNDLCWS
WAFVTWDEKRQCRVIEVAQNDFNTYTSFLRDRAVPVPDDVETVWLRTRVRTQTYGYDYSF
DGEQWHDLGVELDAKILSDDYVNQRYGGFFTGAFVGLAAVDLSGYDATAEFVDFDYRELS
E
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgaaaacccggtactgcccggattcaacgccgatccgtcgatgatcagggtc
ggagacacctactacatcgcgaattccacgttcgaatggtggcctggcgtgcgtctgcac
gagtcgaaggacatggtgcattggcgcctgttgccgagcccgctgaaccgtcgttcgcag
atcgacatgcgcggcaacccgtcctccggcggcgtgtgggctcccgacctgtcctatgcg
gacggcaagttctggctcgtgtactccgatgtcaaaatcgtcaacggcgcgttcaaggac
tgcacgaactacctcgtgaccgccgaggatatccgtggcccgtggagcgaaccgatccgg
atcaacggcgttggcttcgatgcaagcctgttccatgacgatgacgggcgcaagtacctc
gtccagcagacttgggatttccgtgaatacaaccatcccttcgatggcatcacgcttacc
gagttcgacgtcgagaccatgcgcctgcgccccgagaccgaacgcacgatttggcgcggc
accgatgtcaaactcgtcgaaggcccgcacctgtacaaaatcaacggcatgtactacctg
ttctgcgccgagggcggcaccgtctggacgcatcaggaggtcgtcgcgcgttcctcgacg
ctcgatgcgatgtcgttcgaggggagcccgtacgacccgttcatcagcaacttcgacacc
ccacgcagctacctgcagaagcaggggcatggcgcactcgtggacacgccatccggcgaa
tggtactacgcgtcgctgtgtgcccggccctggcaccatgagaacgaatcggtgaccgat
ccgcgtggatggtgcaccctgggacgtgagacgtccatccagaaagtcgaatggaccgat
gacggctggcctgtcgtcgtcggcggccatggcggacaacgcgtcgtcgaggcgccgcaa
gacgccatcgagaccgaggcaccggccgatcacagccagcatgacgatttcgaggcgtcg
cagctcgccttggattggaacacgctgcgtgtgcccttcgacgaatcgatgggttccgtc
ggaggcggcacgctgaccttgcgtgggcagggatcgctgtgcaacctcttcgacctgtcc
ctcgtcgcccgccgttggcaggcgttcgatttcgacgcgtctgtcggtgtgcgattcgac
cccaccaactaccggcagatggccggtctgacgaactactacaacgacctgtgctggtcg
tgggctttcgtcacttgggatgagaagcggcagtgccgtgtgatcgaagtcgcccagaac
gatttcaacacctacacctcgttcctgcgggaccgggcggtgccggttcccgatgatgtg
gagaccgtatggctgcgcacgcgtgtgcgcacgcagacctatggttacgactattcgttc
gatggtgagcagtggcatgacctcggtgtcgaactggacgcgaagatcctgtcggacgac
tatgtgaaccaacggtatggcgggttcttcaccggtgcgttcgttgggctcgcggcagtg
gacctgtcgggctatgacgcaacggcggagttcgtggacttcgattaccgcgaattgagt
gaatga
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integrated database retrieval system
