Bifidobacterium animalis subsp. lactis BB-12: BIF_00405
Help
Entry
BIF_00405 CDS
T01840
Name
(GenBank) glycoside hydrolase family 43 protein
KO
K01198
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
bbb
Bifidobacterium animalis subsp. lactis BB-12
Pathway
bbb00520
Amino sugar and nucleotide sugar metabolism
bbb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bbb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
BIF_00405
Enzymes [BR:
bbb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
BIF_00405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_43
Motif
Other DBs
NCBI-ProteinID:
ADC85536
LinkDB
All DBs
Position
606203..607885
Genome browser
AA seq
560 aa
AA seq
DB search
MTATTATMDITNPVLRGMYPDPSWMWDERGERVALVNSSFELVPGLPIHVSDDIANWELA
GNAVDEAMAQRLLIPFVLDSGGLYAPTLRMIRGKYVIACTVARIDLDAADAAGVDPESIE
AARTSQGNFIIEADALEGPWRGPYWIEGAEGIDPDIFEDLDGSVYWTQTRPAVRPRWEGQ
TEVWTQRIDPETWRLCASHDADGDYGKTVLWTGYGVEAVWAEGPHLYRIGDWVYLMTAEG
GTSFDHSEMTMRTWAPDGLGPAIESLQGQAHADGTEPRAPRADERSVVGRYARLFHPCKK
NPFLTHRHLGLEERVQCVGHADLLHHPRLGWWVACLGSRETPTADHGALSFLGRETFVAP
VEWQHDPAQWSLESNGPAQRRTDDPGWPVLAGGAGRLAQTLRIDAADGTLLDMRIGPCES
QAVVDARMPFTVGEGEAAAVRADGVVYRRMPEDRCVVLCPPRGTVRIRQDSRHTLSVATD
GASVQWALGEGPERREGMVPISEGEPGSVMLVFDKGMARVVVAQSAEQAWEAPAVEVIDV
APLSTEWSGGFVGCLVGCEA
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcaacgaccgcgaccatggacatcaccaatcccgtactgcggggcatgtacccc
gacccaagctggatgtgggacgagcgcggggagcgagtggccctggtgaattcctcgttc
gaactggtgccgggactgccgatccacgtctcggacgatatcgcgaactgggagcttgcg
gggaacgccgtcgacgaggcgatggcgcaacggctgctgatccccttcgtgcttgattcc
gggggattgtatgcgccgacattgcgcatgatccgcgggaagtacgtgatcgcatgcacg
gtcgcccgcatcgatctggacgcggccgatgcagctggggtcgacccggagtcgatcgag
gcggcccgcacaagccaaggcaacttcatcatcgaagccgatgcgcttgagggaccatgg
cgcggcccgtactggatcgagggcgccgaggggatcgatccagacatcttcgaggacctt
gacggctccgtgtactggacgcagacaagaccggccgtacgcccgcgctgggaagggcag
accgaggtgtggacccagcggattgacccggagacgtggcggctgtgcgcgtcgcatgac
gcagacggagactacggcaaaacggtcctctggacgggatacggcgtggaggcggtgtgg
gccgaagggccgcacctgtaccgcatcggcgattgggtatatctgatgaccgcggaaggc
ggcacaagcttcgaccacagcgagatgaccatgcgcacgtgggcacccgacgggctcgga
cctgcgatcgaatccctgcagggccaagcgcatgcggacgggaccgagccgcgcgcgccg
cgtgccgacgaacggtcggttgtggggcggtatgcgcgactgttccatccgtgcaagaag
aatccgttcctgacgcaccggcatctgggtttggaggagcgcgtgcagtgtgtgggccac
gccgatctgctgcatcatccacggctcggctggtgggtcgcgtgcctgggttcgcgcgag
acccccaccgcggaccatggggcgctcagtttcttgggcagggagacctttgtggcacct
gtcgagtggcagcacgatccggcgcaatggtcattggaatccaatgggcccgcgcaaagg
cggaccgatgacccgggctggccggtgctcgctggaggagcggggcgtctggcgcagaca
ttgcgcatcgatgcggcggacgggaccctgctcgacatgcgcatcgggccgtgcgaatcg
caggctgtcgtcgatgcgcgcatgccttttaccgtcggcgagggcgaagccgcggccgtg
cgcgcggatggcgtggtgtaccggcgtatgcctgaagacagatgcgtcgtgctgtgccca
ccgcgtggcacggtgcgcatccggcaggacagccgccatacactgagcgtggcgaccgat
ggggcgtcggtgcagtgggcgctcggcgagggaccggagcgcagggagggcatggtgccg
atctccgaaggggagccggggtcggtcatgctcgtcttcgacaaaggcatggcgcgtgtg
gtcgtggcgcagtccgcggaacaggcatgggaggcgccggccgtcgaggtgatcgacgtg
gcgccgctgagcactgaatggtccggaggcttcgtggggtgcctcgtcggttgtgaagca
tag
DBGET
integrated database retrieval system
