Bifidobacterium animalis subsp. lactis BB-12: BIF_00604
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Entry
BIF_00604 CDS
T01840
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
bbb
Bifidobacterium animalis subsp. lactis BB-12
Brite
KEGG Orthology (KO) [BR:
bbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbb03019
]
BIF_00604
Enzymes [BR:
bbb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BIF_00604
Messenger RNA biogenesis [BR:
bbb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BIF_00604
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
Helicase_C
DEXQc_Suv3
AAA_22
DUF4349
Sigma54_activat
nSTAND3
MTR4-like_stalk
Motif
Other DBs
NCBI-ProteinID:
ADC85827
LinkDB
All DBs
Position
complement(930466..933057)
Genome browser
AA seq
863 aa
AA seq
DB search
MAGRNKRNRHSESTDERELSPAERYRAFKESRKRMQSVAARFADRMPFELDAFQQDANEA
LEAGSNVLVAAPTGAGKTVVADFAIYLAQQRNVKAFYTTPIKALSNQKYHDLVDMYGADK
VGLLTGDTSINSEADIVVMTTEVLRNMLYEHSTTLNALGYVILDEVHYLADRFRGPIWEE
VIIHLPQSVRIIGLSATVSNVEDFADWIESVRGDTKLVVSEHRPVPLDQYVLLQKDPRTE
PELFDLYCRDDMGEQTVKMNARLMNRLDELDRMEARRARADTHGRSERRQDRGGKRKFVR
KPERYQPRRWAVVDELNFLGMLPAIYFVFSRNGCDEAVEQCLNAGLRLTTDEEALHIRKI
VDEMIEGQLTREDLKTLHFSQFRYALEEGFAAHHAGMIALFKQIVERLFEEGLIKCVFAT
ETLALGINMPARSVVVEKLEKYNGTGIVPLTPGEYTQLTGRAGRRGIDTIGNAIVVDHRD
FKPETAVALSSKRVYPLHSSFKATFNMAVNLLNSSDYETARDTLDHSFAQWEANESAWDL
EARIDKLRKAIAGYEEAMGNDAGDMVELLRIRMKLSDLQKNERRRLKHEVFKSNEERSRA
FRRLDAQIAQLKEQEANHPAKRSADFKTLMKWGHRWVRETKELERLEYRYESRTSSVARQ
FDRICHSLEVLGYLETADENGHIDYRLTEYGQLLRRLYTERDLVLAQAITHGIFDDLNAP
ELAAVMSSLLYEPRRGEGGEPRRYPGGPRGRVMQAANALRDMDGQIIALCEANGLENYLQ
PLDFGIVDLMYNWAYGDSLSEVLEHSDMTGGDFVRTAKRIADVLQQIAVAEPYLGEGGAE
LAALAHEAYERVNRGIVAYSGVD
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggcaggacgaaacaaaaggaacaggcattccgagtcaacagacgagcgtgaactcagc
ccggccgaacggtaccgggccttcaaggagtcgaggaagcgcatgcagtctgtagcggca
cggttcgcggaccgtatgccattcgagttggatgcctttcagcaagatgccaacgaggct
cttgaggccggctccaatgtgcttgtggcggcaccgaccggcgccgggaaaaccgtggtg
gcggatttcgccatatatctggctcagcaacgcaatgtgaaggcgttctacacgacgcct
atcaaggcgctgagcaaccagaaataccatgatctagtcgacatgtacggtgcggataag
gtggggttgctcaccggtgacacctcgataaattccgaggccgacatcgtggtgatgacc
accgaagtgctgcgcaatatgctctacgagcattcgacaacgctcaacgccttgggctat
gtgattctcgacgaggtccattatctcgctgacaggttcagaggaccgatttgggaggaa
gtgatcatccacctgcctcagagcgttcggatcatcggactctccgccactgtgtcgaat
gtcgaggactttgcagactggattgaatccgtacgcggggacaccaagctcgtggtgtct
gaacaccggccggttccgctggaccagtacgtgttattgcaaaaggatccacgcaccgaa
ccggagttgttcgacctgtattgcagggacgacatgggcgaacagaccgtcaaaatgaat
gcacggctgatgaaccggcttgacgagctcgaccgtatggaggcgcggcgcgcgcgtgcg
gacacccatggtaggtcggagcggcggcaagaccgcggaggcaaacgcaagttcgtgcgc
aagccggaacgatatcagcctcgccgttgggcggtcgtcgatgaactgaacttcttgggc
atgctccccgccatatatttcgtgttctcacgcaatggctgtgacgaggcagtggaacag
tgcctcaacgccgggttgcggctcaccactgacgaggaggctctgcacatccgcaagatc
gtggatgagatgattgagggacagctcactcgtgaggacctgaagaccctgcacttctca
cagttccgctatgccttggaagagggctttgccgcgcaccatgccggtatgatcgcgctg
ttcaagcagattgtcgagcgcctgttcgaagaggggctcatcaagtgtgtgtttgccacc
gagacactggcgctcggcatcaacatgccggcacgcagcgtcgtggtggagaagctggag
aaatacaatggcactggcatcgttccattgaccccgggggagtacacccagctcaccggc
cgtgccggacgccggggcatcgacaccataggcaatgccatcgtggtcgatcaccgcgat
ttcaaacccgagacggcagtggcattgtccagcaagcgcgtctacccgctgcattcgagc
ttcaaggcgaccttcaatatggccgtcaatctactcaactccagcgattatgagacggca
cgagacaccctcgaccattcgttcgcccaatgggaagccaatgagtcggcatgggatctc
gaggcacgcattgacaaactgcgcaaggccatagctggctatgaggaggccatgggcaat
gatgccggtgacatggtggagctgctgcgcattcgcatgaagctcagcgacctgcagaag
aacgaacgccggcggctcaagcacgaggtgttcaagtcgaatgaggagcgttcgcgtgca
ttccgccggctggatgcacagatcgcccagctcaaagagcaggaggcgaaccaccccgcc
aaacggtctgcggatttcaagaccctgatgaaatgggggcaccgctgggtgcgtgagacc
aaggaactcgagcgtctggaataccgctatgaatcccgtaccagttcggtggctcgtcag
ttcgaccgcatatgccatagcctcgaagtgctcggttaccttgagacagccgacgagaac
ggtcacatcgactacaggctcaccgaatacgggcagctactcaggcgactctacaccgaa
cgtgatctggtattggcgcaggcgatcacccatggcatcttcgacgatctcaatgccccc
gaactcgctgcagtgatgtcgtcgttgctgtacgaacctcgccgaggcgagggtggggaa
ccgagaaggtacccgggaggcccccgtggtcgtgtgatgcaggccgcgaacgccttgagg
gacatggatgggcagatcatcgcattgtgcgaggcgaacggtctggagaactatctgcaa
ccgctggactttggaatcgtcgatctcatgtacaactgggcatatggcgactcgctctcc
gaagtgctcgagcacagcgacatgaccggtggggatttcgtacgtacggcgaaacgcatt
gccgacgtattgcagcagatcgccgtcgccgaaccatatctgggggagggcggtgccgag
ctcgccgccctcgcgcatgaggcctacgagcgcgtcaatcgtggcatcgtggcttactcc
ggcgtggactga
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