Bifidobacterium animalis subsp. lactis BB-12: BIF_01247
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Entry
BIF_01247 CDS
T01840
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
bbb
Bifidobacterium animalis subsp. lactis BB-12
Pathway
bbb03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bbb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
BIF_01247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbb03019
]
BIF_01247
03009 Ribosome biogenesis [BR:
bbb03009
]
BIF_01247
03036 Chromosome and associated proteins [BR:
bbb03036
]
BIF_01247
Enzymes [BR:
bbb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
BIF_01247
Messenger RNA biogenesis [BR:
bbb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BIF_01247
Ribosome biogenesis [BR:
bbb03009
]
Eukaryotic type
90S particles
RNase
BIF_01247
Prokaryotic type
rRNA processing factors
BIF_01247
Chromosome and associated proteins [BR:
bbb03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
BIF_01247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
RM44_endonuclase
PWWP_KDM3B
Ribosomal_S5
Motif
Other DBs
NCBI-ProteinID:
ADC85305
LinkDB
All DBs
Position
complement(345434..346210)
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AA seq
258 aa
AA seq
DB search
MSVRVSTQEIGESAMQELFTALGTTLETDLLVEALTHRSFSHEHEGVKNYERLEFLGDAV
LEFVVTETLFKQYPDKSEGQLAKIRAKAVSEESLSAIARDRLHVGPYILLGHGESEQGGA
EKSSILCDIVESLIGATFVQYGVDKAREVVHHLVDDTLAEVATEGPALDWKTSLTVKAHE
MGLPEPRYQMSVGGPEYALEFTAFAMLGDSKEVLGVGNGSSKRKAQLAAAEQAWHVLDER
EHAPKPERKRERRPLTDA
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttcgtgtaagcacgcaggaaatcggcgaatcggcaatgcaggagctgttcacc
gcgctcggcaccacattggagaccgatctgctcgtcgaggcgctcacccaccgctcgttc
tcgcacgagcacgagggtgtgaagaactacgagcggcttgagttcctcggcgacgcggtg
ctcgaattcgtcgtcaccgagacactgttcaagcagtatcccgacaaaagtgagggccag
ttggcgaagattcgcgcgaaggccgtgtcggaggagtcgctgagcgcgatcgcgcgcgac
cggctgcacgtgggtccctacattctgttggggcacggcgagagcgagcagggcggcgcc
gagaaaagctcgattctgtgcgacatcgtggagtcgctgatcggcgcgaccttcgtgcag
tacggcgtggacaaggcgcgcgaagtcgtgcatcatctcgtcgacgacacactcgccgag
gtggccaccgaaggtccggcgctcgattggaagacgtcactcacagtgaaggcccacgag
atgggcttgccggaaccgcggtaccagatgtccgtcggcggaccggagtacgcgctcgaa
ttcaccgcattcgccatgctcggcgattccaaggaggtgctcggcgtgggcaacggcagc
agcaaacgcaaggcgcagctggccgcggccgaacaggcgtggcatgtgctcgacgagcgc
gagcatgcgccgaagcccgagcgcaagcgcgaacgccgcccgctgaccgacgcctga
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integrated database retrieval system
