Bifidobacterium animalis subsp. lactis BB-12: BIF_01283
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Entry
BIF_01283 CDS
T01840
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
bbb
Bifidobacterium animalis subsp. lactis BB-12
Pathway
bbb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BIF_01283
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbb03400
]
BIF_01283
Enzymes [BR:
bbb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BIF_01283
DNA repair and recombination proteins [BR:
bbb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BIF_01283
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
Motif
Other DBs
NCBI-ProteinID:
ADC85658
LinkDB
All DBs
Position
746003..748246
Genome browser
AA seq
747 aa
AA seq
DB search
MQPAFDGMGMRRRSPRKAAPRKPAAQLPVARVVLDVQATHLGQPFDYFVDDSMSEAAQPG
VLVRVRFGGQRVSGIIWERVNDSDTPTNAIRYIEKVVSPRVLVPSQMRRDITAVANAYGG
TIANVLRVAMPGRVAGVEKEPNATMQSASDVESAADEASYADSPMVDRRGRFASRAEDHF
PVIAKAYEQAQTLRASLTAPQGFSAFVIDALPGVGAWERTLAWMALTAMGAGKSAVLVMP
GMREVWSMVHALENMGLHVFAPNARQIYEGDIAVLSAALSPADRYRAYLAIGEGRVTCVV
GTRAAMYAPVPDEALFAIVDDDAYQYADGLMPYANARGVCRLRAKLHGGVFVAIGRARSV
LSEWESQTSSVVSEVAGPSVAVHGFSDVIKSQAPPVRWLNRDELNRLADPSVGARVPHTA
VRVLSKALEHGPMLFSIPHDGVTESLSCAQCLQLARCLRCSGPLVRIPGADAPRCSWCGA
SAVDWHCRHCGAERLRVIRVGAVGTVQELQGLFRGVPMLVSSQSQGVVDHVDAAPRIVVA
TPGCEPMVHTQDGTTGAYEAVAILDAWTSLYDLRLDARVDVLSNWMQAMSLCKSRAAGGR
GLLIGETYPTLARSLMLWDPRVVASNELADRIATGLPPIVSAACIWGRRDAVERALHNIG
IANGDWAWVESGEGKVPSLLGITPLAPDRTIDARELDEMGDRVKAVVRVSHARRAELALR
LRTEVARHVASRESGELRFRMDPKDLL
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgcagccggctttcgacggcatgggcatgcggcggcgctcgccgcgcaaggcagcgccc
agaaagcctgctgcccagctgccggtggcgcgggtggtgctggatgtgcaggccacgcat
ctggggcagcccttcgactatttcgtcgacgacagcatgagcgaagccgctcagccgggt
gttctggtccgggtcagattcggaggccagcgcgtcagcggcattatttgggaacgggtg
aacgacagcgatacgccgacaaatgccattcgctacatcgagaaggtcgtttcgccgcgc
gtgctcgtaccgagccagatgcgccgtgacatcaccgccgtggccaatgcctacggcggc
accatagcgaacgtgctgcgcgtggccatgccgggcagggtcgccggcgtggagaaggag
cccaatgccaccatgcaatcggcaagcgacgtggagtcggctgccgatgaggcgtcctat
gccgattcgccgatggttgatcgcaggggtcgtttcgcctcacgtgccgaagaccatttc
cccgtgatcgccaaagcctatgagcaggcacagaccctacgtgcctcactcaccgcaccg
caggggttctcggcgttcgtcatcgatgcccttccgggggtcggtgcatgggaacggaca
ctggcctggatggcgctcaccgccatgggggcggggaaatccgccgtgctggtgatgccc
ggcatgcgtgaggtgtggagcatggtgcatgcgctggagaacatgggactccatgtgttt
gcgccaaatgccaggcagatatacgagggtgacatcgcggtgttgagtgcagcgctctcg
ccggccgacagataccgggcgtatctggcgattggcgaggggcgggtcacttgcgtggtg
ggtacgagggcggccatgtatgcgcccgtaccggacgaggcgctgtttgcgattgtggac
gacgacgcctaccagtatgcggatggcctcatgccctatgcgaatgcgcgtggtgtgtgc
cgtctgcgtgccaagctccatggaggcgtcttcgtcgcaatcggaagggcgcgtagcgtg
ttgagtgaatgggaaagccaaacctcctcggtcgtgtcggaggtcgctggtccgagtgtg
gcggtgcacggcttttccgatgtgattaaaagccaggcaccgccggtacggtggctgaac
cgtgacgaactcaaccggctcgccgatcccagcgtcggtgccagggtaccgcacactgcg
gtgcgtgtgctgtcgaaggcgcttgagcatggccccatgctgttctccataccgcacgat
ggcgtcaccgagtcgttgagttgcgcgcagtgcctgcaactggctcgatgcctgcgttgc
agcgggccattggtgcgtattcccggggccgatgccccgcgatgcagctggtgtggcgca
tcagcagtggactggcattgcaggcattgcggagcagagcggttgcgcgtgatccgtgtg
ggggcggtgggaaccgtgcaggaattgcagggcctattccgtggcgttcccatgctcgtg
tcgagccaaagccaaggggttgtggatcatgtggatgccgccccgcgcattgtcgtcgcc
actcccggatgcgaacccatggtgcatacgcaagatggtacgacgggagcctacgaggcg
gtggcgattctcgatgcctggacgagtctgtacgatctgcgtctcgatgctcgcgtggat
gtgctgtccaattggatgcaggcgatgtcgctgtgcaaatcacgtgccgccggaggcagg
ggactgctgatcggcgagacgtatccgactctggctcgttcgctcatgctctgggatccc
cgcgtggttgcgagcaatgagctcgcggaccgcattgcgacggggctgcccccaatcgtc
agtgccgcctgcatttgggggagacgtgatgcggtggaacgtgccctgcacaacataggc
attgcgaacggagattgggcatgggtggaaagcggagaagggaaggtcccctcactgctc
ggcatcacccctctcgctccagatcgcacgatcgatgcccgtgaactcgatgagatgggc
gatagggtgaaggcggtcgtgcgcgtctcgcatgcccgacgtgccgaactcgcattgcgg
ctgcgcactgaggtggcgcgtcacgtggcctctcgcgaaagtggggaactgcggttcaga
atggacccgaaagatctgctgtga
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