Bifidobacterium animalis subsp. lactis BB-12: BIF_02011
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Entry
BIF_02011 CDS
T01840
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bbb
Bifidobacterium animalis subsp. lactis BB-12
Pathway
bbb03030
DNA replication
bbb03430
Mismatch repair
bbb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BIF_02011
03430 Mismatch repair
BIF_02011
03440 Homologous recombination
BIF_02011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbb03032
]
BIF_02011
03400 DNA repair and recombination proteins [BR:
bbb03400
]
BIF_02011
Enzymes [BR:
bbb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BIF_02011
DNA replication proteins [BR:
bbb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BIF_02011
DNA repair and recombination proteins [BR:
bbb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BIF_02011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
DEDDh_C
SAM_MT
Motif
Other DBs
NCBI-ProteinID:
ADC84662
LinkDB
All DBs
Position
1475637..1476203
Genome browser
AA seq
188 aa
AA seq
DB search
MKPASRIPMNYISLDLETTGFSAQNDRITEIGAVKVRDGKIVDRFTQLVNPGRRVSARIT
ELTGISNEMLEDQPVIEDILGDFIHWTENDRLVGHNTKFDLSFLIANAERVFSDSTRFSV
RPIDTMHIDRLLFPSERHRLVDLIQRYGIGDVEEHRALSDATQTYQCLEWQRRYIDTRSA
DISMRTCV
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgaagccagcatcgcgaatccccatgaattacatctcactcgatctggagacgaccggc
ttcagcgcacagaatgaccgtatcaccgagattggcgccgtcaaagtgcgcgacggcaag
atagtggatcggttcacgcagctcgtcaatcccggcaggcgcgtctccgcacgcataacg
gagctcacgggcatttccaacgagatgctcgaagaccagcccgtcatagaagacatactc
ggggatttcatacactggaccgagaatgaccgtttggtgggacataacaccaaattcgat
ctctcattcctcattgccaatgcggaacgtgtgttcagcgactccacacgcttttccgtg
cgtcccattgacaccatgcatatagaccgactgctgttcccctctgaacggcatcgtctt
gtcgatctgatccagcgttacggcattggcgatgttgaggagcaccgcgcgctttctgac
gccacgcagacgtaccaatgcttggaatggcagcggcgttatattgacacccgctcggca
gacatctccatgcgtacgtgcgtgtga
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