Bifidobacterium animalis subsp. lactis BB-12: BIF_02022
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Entry
BIF_02022 CDS
T01840
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
bbb
Bifidobacterium animalis subsp. lactis BB-12
Pathway
bbb00300
Lysine biosynthesis
bbb00470
D-Amino acid metabolism
bbb01100
Metabolic pathways
bbb01110
Biosynthesis of secondary metabolites
bbb01120
Microbial metabolism in diverse environments
bbb01230
Biosynthesis of amino acids
Module
bbb_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bbb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BIF_02022
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BIF_02022
Enzymes [BR:
bbb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BIF_02022
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ADC84804
LinkDB
All DBs
Position
complement(1668833..1670422)
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AA seq
529 aa
AA seq
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MAISPIWPADTARNSNGELTFHGITASTLLDEFGSPLYVLDLDEVRARASHFVKAAAHAF
TNNTTHVSYAAKAFLSKEMARIVTEEGMFVDTCTLGEMKIALAAGVPGRRLVLHGNNKSD
EEIELAIAEGFSKIVIDSPDEPARIAAIAERLGKRARVMLRVTSGIHAGGHEYVSTAHED
QKFGVALLPAGADTEIVDNIDQLQDVSPAATNALVHETELERGGETKQQADRQLRYDVRY
PYDLNAADVTEGDRLLAAAMELVANGPAIAVLREIAKYGNLELVGVHSHIGSNIHDAEAF
IQAAKRMMLLRKTFYATNAYTLPEVDLGGGYSVAYTDDEDRMDVDRELGRLADAVSKTNR
LLGMPAPIISFEPGRWIVAPAGVTLYRVGTVKTVQLGDGFTNNAGERIRERAYISVDGGM
SDNIRPALYDAKYTAILANRESAEPAKLSRVVGIHCESGDIVVNEANLPADVHRGDILAV
PVTGAYGRSMASNYNMALIPAVVGIDGHGAHVMMRRQTIDDLLALDVSE
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggccatcagtccaatctggccggcagacacggccaggaattccaacggcgagctcacg
ttccacggcatcaccgccagcaccctgctcgacgaattcggctcgcccctgtacgtgctg
gatctcgacgaggtgcgtgcccgcgccagccacttcgtgaaggccgccgcacacgcgttc
acgaacaacaccacgcatgtgagctatgccgccaaggcgttcctctcgaaggaaatggcg
cgcattgtgaccgaggaaggcatgttcgtcgacacctgcacgctcggcgagatgaagatc
gcgctcgccgccggcgttcccggtcgtcgactggtgctgcacggcaacaacaagagcgat
gaggagatcgaactcgccattgccgagggcttctcgaaaatcgtgatcgattcgccggac
gagcccgcacgcatcgccgcgattgcggaacggctcggcaagcgcgcccgcgtgatgctg
cgcgtgacctccggcattcacgccggcggccacgaatacgtctccaccgcgcacgaggac
cagaaattcggcgtcgcactgctgcctgcaggtgccgacaccgagatcgtcgacaacatc
gaccagctgcaggacgtctccccggcggccacgaacgcgctcgtgcacgagaccgagctc
gagcggggcggcgagacgaagcagcaggcagacaggcagctgcggtacgacgtgcgctac
ccgtacgatctgaacgccgccgacgtgaccgagggtgatcgcctgcttgccgccgcgatg
gagctcgtggccaacggtccggccatcgccgtgctgcgtgagatcgccaagtacggcaat
ctggaactcgtgggcgtgcactcgcatatcggctcgaatattcacgatgccgaggcgttc
attcaggcggccaagcgcatgatgctgctgcgcaagacgttctatgcgacgaatgcctac
acgctccccgaggtcgatctcggcggcggctattcggtcgcctacaccgacgatgaggac
cgcatggacgtggaccgcgaactcggccgtcttgccgacgccgtgtcgaagacgaaccgc
ttgctcggcatgcccgcgccgatcatctcgttcgagccgggccgctggatcgtcgccccc
gccggcgtgacgctctaccgtgtgggcaccgtgaagaccgtgcagcttggcgacggcttc
acgaacaacgcgggcgagcggattcgcgaacgcgcatacatctcggtggacggcggcatg
agcgacaacattcgccccgcgctctacgacgcgaaatacaccgcgattcttgccaaccgc
gagtccgctgaaccggcgaagctctcgcgcgtcgtcggcatccactgcgagtccggcgac
attgtggtgaatgaggcgaatcttcctgccgacgtgcaccgcggcgacatcctggccgtg
ccggtcaccggcgcctacggccgttcgatggcgagcaactacaacatggcgctcattccg
gccgtcgtcggcatagacgggcatggcgcgcatgtgatgatgcgtcggcagacgatcgac
gacctgctcgcgctcgacgtgagcgagtga
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