Bifidobacterium animalis subsp. lactis BLC1: BLC1_0397
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Entry
BLC1_0397 CDS
T01841
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bbc
Bifidobacterium animalis subsp. lactis BLC1
Brite
KEGG Orthology (KO) [BR:
bbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bbc03016
]
BLC1_0397
Enzymes [BR:
bbc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BLC1_0397
Transfer RNA biogenesis [BR:
bbc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BLC1_0397
Prokaryotic type
BLC1_0397
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Paralog
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Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
PseudoU_synth_2
DKCLD
Dioxygenase_C
Motif
Other DBs
NCBI-ProteinID:
AEN76179
LinkDB
All DBs
Position
491211..492263
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AA seq
350 aa
AA seq
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MGTGKRDAKVNGVLIVDKPQGVTSHDIVAAVRAALHTRKVGHAGTLDPMATGALVIGVGH
ATRLLQYIVEHTKTYSATIRFGQRTTTDDADGEFVEREAEAAVLPTLEQVREAVANEYTG
DIEQIPNAVSAIKVNGQRAYDLAREGRHVELKARRVTVHAFDVLGGRQTQAANGTPVLDV
DVRVTCSAGTYIRALARDLGNDFHCGAHLTRLRREAVGAFRVRDARIVRAHAEARTFVNR
DGEEITRNRAVLDCVGEDLAGHLLTMVQAAQLTLPVLAVSEAQAADLRFGRRIVAQAPTD
DERPAHHHGEHVWAAIGSADGEPEVVAIVERAKHHEFKPVTVFAANTGNE
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
gtgggcaccggaaaacgcgacgcgaaggtgaacggcgtgctcattgtagacaagccgcag
ggcgtgaccagtcacgacatcgtggcggccgtgcgtgccgcgctgcacaccaggaaggtg
gggcacgccggcacgctcgacccgatggccaccggcgcgctcgtgatcggcgtgggtcat
gccacacgtctgctgcagtacattgtcgagcacacgaaaacctacagcgccacgattcgc
ttcggccagcgcacaaccaccgatgacgccgacggcgagttcgtggagcgggaagccgag
gccgccgtgctgccgacgctcgaacaggtgcgcgaagccgtggcgaacgaatacaccggc
gacatcgagcagattccaaacgccgtctccgcgatcaaggtgaacggccaacgcgcctac
gatctggcccgtgaaggccggcatgtcgagctcaaggcgcgccgggtgaccgtgcatgcg
ttcgatgtgctcggtggtcggcaaacgcaggccgcgaacggcacgccggtgctcgatgtc
gacgtgcgcgtcacctgctcggcgggcacctacattcgcgcgctcgcccgcgatctcggc
aatgatttccattgcggcgcgcatctgacccgcctgcgcagggaagcggtgggggcgttc
cgcgtgcgtgacgcccgcattgtgcgcgcgcatgccgaggcacgcaccttcgtgaaccgc
gacggcgaggagatcacccgcaatcgcgcggtgctcgattgtgtgggggaagatttggcc
gggcatctgctcacgatggtgcaggccgcacagctcacgctgccggtgctcgccgtgagt
gaagcgcaggcggcggatttgcgttttggtaggagaatcgttgcacaggcaccgaccgac
gatgaacgaccggcacaccaccacggcgagcacgtgtgggccgccattgggtccgccgat
ggcgagcctgaggtcgtggcgattgtcgagcgcgcgaaacaccacgaattcaagccggta
acggtgttcgctgcgaatacgggaaacgaatag
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