Bifidobacterium animalis subsp. lactis BLC1: BLC1_1059
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Entry
BLC1_1059 CDS
T01841
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
bbc
Bifidobacterium animalis subsp. lactis BLC1
Brite
KEGG Orthology (KO) [BR:
bbc00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BLC1_1059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbc03021
]
BLC1_1059
Transcription machinery [BR:
bbc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BLC1_1059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_20
DprA_WH
CDC27
Motif
Other DBs
NCBI-ProteinID:
AEN76833
LinkDB
All DBs
Position
complement(1271497..1272963)
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AA seq
488 aa
AA seq
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MVAKETTSTEKAAKKKASESAHDEAAVEEKGKTTRRRASSKASSAKKGSAGKTTKRATAR
KKKDAAESESTPARKTRAASKTGAKKAISKSEEIDDEDMIGEDVIDEEDLDLDEDLDADE
NDDDLEDEESEDEPEPEEDDDEEPQAPKEPKEKGAFVVSDNDEDDEALLANPGVNPKRRV
VTTGATADPVKDYLKQIGRVSLLNAEQEVDLSERIEAGLYAQHLLDTEGDTMEFRRKREL
KWAAADGKKAKDHLLEANLRLVVSLAKRYTGRGMLFLDLIQEGNLGLIRAVEKFDWKKGF
KFSTYATWWIRQAITRAMADQARTIRVPVHMVEVINKLSRVQRQMLQDLGREPTPDELAR
ELDMPVEKVQEVQKYGREPISLHTPLGEDGDSEFGDLIEDTDAIAPSEAVAFSLLQEQFR
QVLETLSPREAGVIKMRYGLEDGQPKTLDDIGRVYGVTRERIRQIESKTMSKLRHPSRSQ
TLRDFLDQ
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
ttggtcgccaaggaaacgacgagcaccgagaaagccgcgaagaagaaggcctccgaaagc
gcccacgacgaagccgccgtcgaagagaagggcaagaccacccgtaggagggcctcctcg
aaggcttcgtcggcgaagaagggctccgccggcaagaccaccaagcgtgccacggcccgg
aagaagaaggatgccgccgagagcgagtcaacgccggcaaggaagactcgtgcggcttcg
aagaccggcgcgaagaaggccatttccaagtccgaggagatcgacgacgaggacatgatc
ggtgaggatgtgatcgacgaggaggatcttgacctcgatgaggatcttgacgccgacgag
aacgatgacgacctcgaggacgaggagtcggaggacgaacccgagccggaggaagacgac
gacgaagagccgcaggccccgaaggagcccaaggagaagggtgcgttcgtcgtcagcgac
aacgatgaggacgacgaagcccttctggcgaatccgggcgtgaatccgaagcgccgcgtg
gtaaccacgggcgcgaccgccgacccggtgaaggattatctcaagcagatcggtcgtgtg
agccttctcaatgccgaacaggaggtcgacctctccgagcgtatcgaggccggcctgtac
gcccagcatctgctcgacaccgagggcgacacgatggagttcagacgcaaacgcgaactc
aagtgggcagccgccgacggcaagaaggcgaaggaccacctgctcgaggccaatctgcga
ctcgtcgtctcgcttgccaagcgttacaccggccgcggcatgctattcctcgaccttatc
caggaaggcaatctgggtctcattcgcgccgtcgagaaattcgattggaagaaaggcttc
aagttctccacctatgccacctggtggatccgtcaggcgatcacccgcgccatggccgac
caggcccgcacgattcgtgtgccggtgcatatggtcgaggtgatcaacaaactctcgcgc
gtccagcgccagatgctgcaggatctgggccgtgagcccacgcccgacgagcttgcccgc
gagctcgacatgccggtggagaaggtgcaggaagtgcagaagtacggccgcgagccgatt
tcgttgcatacgccgctgggtgaggacggcgattccgaattcggcgatctgatcgaagac
accgatgccatcgcgccatcggaggcggtcgcattctcactgctacaggagcaattccgt
caggtgcttgaaacgctctcgccgcgtgaggcgggcgtgatcaagatgcgctatggtctc
gaggacggccagccgaagacgctcgacgacatcggccgcgtatatggcgtgacccgcgag
cgcattcgccagattgagtcgaagaccatgtcgaagttgcgtcatccgtcccgttcgcag
acgctgcgcgacttcctcgatcagtga
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