Belliella baltica: Belba_1555
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Entry
Belba_1555 CDS
T02134
Name
(GenBank) DNA/RNA helicase, superfamily II
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bbd
Belliella baltica
Pathway
bbd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Belba_1555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbd03019
]
Belba_1555
Enzymes [BR:
bbd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Belba_1555
Messenger RNA biogenesis [BR:
bbd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Belba_1555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
AAA_19
Flavi_DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AFL84167
UniProt:
I3Z4J9
LinkDB
All DBs
Position
complement(1647244..1648608)
Genome browser
AA seq
454 aa
AA seq
DB search
MSDSTPSFENFKLNKQLLEAVKEAGYTKPTPIQEKAIPLALAGHDVLGIAQTGTGKTAAY
VLPILFKAKYAQGQHPRVLILAPTRELCMQIEEAVIDFGKFTDLRFVCLYGGLGPKPQIE
KLKAGVDIIISTPGRFMDLYKKGEIFVREIKTMVMDEADKMLDMGFTPQIRAILEVIPTK
RQNLLFSATFSEKVERLSTEFLEFPERVEISAQATTAETIYQIKYLVPNIKTKTNLLEHI
LADENVKRVIVFTKSRKNAESVFTYLSRKNLGEIRVIHANKGQNTRINSMEDFKAGDVRI
LVATDVAARGLDITMVSHVINFDVPLIYEDYVHRIGRTGRAEQDGAAITFVNPAEIYHFE
RIEEIIRMTVMEANIPDEVSITPTPFIEKQIYDREIDGQKRKENPDFKGGFHEKKAIPRP
NPNKPKEKRGNKNSKAKRNRNQMKTQGKWKKKGG
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatagcactccatcttttgaaaattttaaattaaataaacagcttttagaagca
gtcaaagaggcaggctacaccaaacctaccccaattcaggaaaaagctataccacttgct
ttagctggacatgatgttttaggtattgcgcagaccggaacaggcaagaccgcagcctat
gtgctaccgattttatttaaagcaaaatatgctcaaggacaacatccgagagttctaatc
cttgctccaacacgtgaactttgcatgcaaattgaggaagctgtgattgattttgggaaa
ttcacagacttgagatttgtatgtctttatggtggacttggccctaaaccgcaaatcgaa
aaattaaaagcaggagttgatattatcatttcgaccccaggcagatttatggatctgtac
aaaaaaggtgaaatcttcgtccgtgaaatcaaaaccatggtcatggatgaagccgataag
atgctagacatgggattcaccccacaaatcagagcaattctagaagtgatccctaccaaa
agacaaaaccttcttttctctgccactttcagtgaaaaagtagaacgactttctacagaa
tttttagaatttcctgaaagggtagaaatctcagcacaagcgacaacagctgagaccatt
tatcagatcaagtatcttgtcccaaatatcaaaaccaaaacaaatctccttgaacacatt
ctagcagacgaaaatgtaaaacgagtgatcgtttttaccaaatcgagaaaaaatgcggaa
tctgtttttacatatttaagcaggaaaaatcttggagaaatccgtgtgattcacgccaac
aaaggacaaaatacacggatcaactccatggaggattttaaagcgggtgatgtaagaatt
ctggttgcaacagacgtggcggcaagagggcttgacatcaccatggtgagtcatgtgatc
aattttgatgtgcctttgatctatgaagattatgttcaccgaattggaagaacaggtcgc
gcagagcaagatggtgcggccattacttttgtcaatcctgcggaaatctatcacttcgaa
aggatagaagaaatcatccgaatgactgttatggaagccaacattccagatgaagtttcc
attactccaacgccatttatagaaaaacaaatctatgatcgtgagattgatggtcagaag
cggaaggaaaaccctgatttcaaagggggctttcacgagaaaaaagcgatcccaagaccc
aaccccaacaagccaaaagaaaaacgtggaaacaaaaactctaaggccaaacgcaacaga
aaccaaatgaaaacccaagggaaatggaagaagaaaggggggtag
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