Belliella baltica: Belba_2035
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Entry
Belba_2035 CDS
T02134
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bbd
Belliella baltica
Pathway
bbd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Belba_2035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbd03019
]
Belba_2035
03400 DNA repair and recombination proteins [BR:
bbd03400
]
Belba_2035
Enzymes [BR:
bbd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Belba_2035
Messenger RNA biogenesis [BR:
bbd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Belba_2035
DNA repair and recombination proteins [BR:
bbd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Belba_2035
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
RecQ-1-like_HTH
HRDC
RecQ_Zn_bind
ResIII
HTH_40
Flagellin_C
HHH
Motif
Other DBs
NCBI-ProteinID:
AFL84608
UniProt:
I3Z5U0
LinkDB
All DBs
Position
complement(2155821..2157998)
Genome browser
AA seq
725 aa
AA seq
DB search
MDQTVKENLKEIFGFSQFRGNQEAIVDNILGGSNTFVIMPTGAGKSLCYQLPAVIKNGTA
VVISPLIALMKNQVDQLNAFGINAYFLNSTLNKSETNKVKKEVLAGNTKLLYVAPESLTK
EENVKFLKEANISFVAIDEAHCISEWGHDFRPEYRRIKSIIAQIGEKLPIIALTATATPK
VQQDIQRNLQMEEADLFKSSFNRTNLYYEVRPKIKNETKKQIIKYIKGQKGKSGIIYCLS
RKKVEEIASLLKVNGINAAPYHAGLDQNVRIKNQDDFLNEELDVIVATIAFGMGIDKPDV
RYVIHYDVPKSLEGYYQETGRAGRDGLEGHCLMFYKYDDIIKLDKFNKDKPVTERENAKI
LLQEMAAYAESSICRRKTLLHYFGEYMEKDCGFCDNCKHPTEKFEGQNFLVTAIEAVKET
NNRFNVEHIVKVIRGEQNDYMKSYGHDKLSVFGIGKDEDERLWKTVVRQAMINNFLEKDI
ENYGVIKVTQKGLDFIKNPYSVMISKDHDFEQMLVNDSTEDISLGGKAYDEKLFELLKLE
RKKVAKSKGLPPYVIFQDPSLEEMATVYPTTREELAQINGVGMGKVTKFGSSFLKLIENY
VEENDIMTASDVVVKTAGNRSKVKISIIQQVDRKINLDEIADNLNISMGELLQEIEQIIY
SGTKLNINYYIENIMDEEREETLHDYFMTAETDNIKAALEELEDEDFAEEEIRVYRVKFI
SEHAN
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
gtggatcaaacagtaaaagaaaatctcaaagaaatatttggcttcagccagttccgaggg
aaccaagaagccatcgttgacaacattttaggtggaagcaatacctttgtaatcatgcct
acaggggcgggaaaatcactatgctatcaacttcccgctgttatcaaaaatggcacagca
gtagtcatttcgcctctaatcgctttgatgaaaaatcaagtagatcaactcaatgccttt
ggcattaatgcttatttcttgaattcaactttaaataaatctgaaactaataaagttaaa
aaagaggtattggcgggaaatactaagttgctttatgtggcgccagagtccttgaccaaa
gaagaaaatgtcaagttcctaaaggaagcaaatatcagttttgtagctatagatgaagca
cattgtatatcagaatgggggcatgacttcagacctgaatacagaaggataaaatcaata
attgctcaaattggcgaaaagttacctattatagccttgaccgctacagctacgccaaaa
gtacaacaggacattcagagaaacttacaaatggaagaagctgatctgttcaagtcttct
ttcaacaggacaaatctctattatgaagttcggccgaagataaaaaatgagaccaaaaag
caaatcatcaaatacatcaaaggccaaaaaggcaaatcaggaattatttattgcttaagt
cgaaaaaaagtcgaagaaatagcttccctactcaaagtaaatggcatcaatgcagcacca
tatcacgctggattagatcaaaatgtgagaatcaaaaaccaagacgactttctaaatgaa
gaacttgatgtcatcgtagccactatcgccttcggaatgggaattgataaacctgatgta
aggtatgtcattcactatgatgtaccaaaatcactggaaggctactatcaagaaactggg
cgagctgggcgagatggtctagaagggcattgtttgatgttttacaaatatgatgacatc
atcaaacttgataaattcaacaaagataaaccagtcactgaacgtgaaaacgccaaaatt
ctacttcaagaaatggctgcttatgcagaaagttcaatttgcaggagaaaaactctactc
cactattttggagaatatatggagaaagattgtggattctgtgacaattgtaagcaccca
acagagaagtttgaaggtcaaaatttcttggttacagcaatcgaagctgtaaaagagacc
aacaatagattcaatgtagaacatatcgtgaaagttatccgaggagagcaaaacgactac
atgaaaagttatggccacgacaagctttcagtatttggaatcggtaaggacgaagacgag
agactttggaagacagtagtcagacaagccatgataaacaattttcttgaaaaagacatt
gaaaattatggagtcatcaaagtgactcaaaaaggcttagatttcataaaaaatccatat
tcagtcatgatcagcaaagatcacgactttgagcaaatgcttgtaaatgattcaactgaa
gatatttcccttggcggaaaagcttatgatgaaaaactctttgaacttttaaagttagaa
cggaaaaaagtagcaaagtcaaaaggcttacctccttatgttatttttcaggacccttca
ctggaagaaatggctacggtctatccaactacccgtgaggaattggcgcaaattaatggt
gtcggtatgggaaaagtcactaaatttggttcgtcttttctaaaacttatagaaaactac
gtcgaagaaaacgacatcatgacggcttcagatgtagtcgtcaaaacagctggaaacaga
tcaaaagtaaaaatctctatcattcagcaggttgatagaaaaataaatctggatgaaatt
gctgataatctgaatatttctatgggggaattgctccaagagattgaacagataatatac
agtggtactaagctgaatatcaattattatattgaaaacatcatggatgaagagcgagaa
gaaacacttcacgattatttcatgactgctgaaacagacaatattaaggctgcgcttgaa
gaattggaagacgaagattttgcggaagaagaaattcgtgtctatcgtgtcaaattcatc
tcagaacacgccaactaa
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