Brevibacillus brevis: BBR47_02120
Help
Entry
BBR47_02120 CDS
T00879
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase beta' chain
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bbe
Brevibacillus brevis
Pathway
bbe03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bbe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BBR47_02120 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbe03021
]
BBR47_02120 (rpoC)
03400 DNA repair and recombination proteins [BR:
bbe03400
]
BBR47_02120 (rpoC)
Enzymes [BR:
bbe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BBR47_02120 (rpoC)
Transcription machinery [BR:
bbe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BBR47_02120 (rpoC)
DNA repair and recombination proteins [BR:
bbe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BBR47_02120 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
BAH41189
UniProt:
C0ZIH1
LinkDB
All DBs
Position
225054..228680
Genome browser
AA seq
1208 aa
AA seq
DB search
MIDVNNFEYMKIGLASPDKIRSWSFGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRSLEEVIYFASYVVTDPGDTPLDKKQLLSEKEYRNYREKYGHSFQAMMGAEAIKRLLA
EIDLDKDVETLKEDLKTAQGQRRNRAIKRLEVLEAFRNSGNHPDWMVLDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLELGAPDIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MALELFKPFVMKELVSKGLAHNIKSAKRKVERVQPEVWDVLEDVIREHPVLLNRAPTLHR
LGIQAFEPVLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARILMLAAQNIL
NPKDGKPVVTPSQDMVLGSYYLTLEREGDKGEGTIYRDPHDAIAAYQQGFISLHTRIVLP
AKRLNKISFTERQENALIVTTVGKVIFNEIFPADMPFINAPTRANLQTMVPDECFIFDKG
TNVSEFIKNLPDPGAVKKGFLGTIISECFRRFGTMKTSMILDRIKELGFTYSTKAGITIA
VADIAVPGKKKDILDAADEKVATVMTQFRRGLITEDERYDRVISIWSKAKDEVTEVLMKS
MDKFNAIFMMANSGARGNVSQITQLAGMRGLMANPSGRIIELPIKSNFREGLTVLEYFIS
THGARKGLADTALRTADSGYLTRRLVDVAQDVIVRETDCGTDKGIRVTAIKDGKEEIEKL
SDRLTGRTCFETLRHPETKEIIVHRNEEISEEVAEYIEKVGITDVYIRNVLACRTSHGVC
KLCYGRNLATGAEVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEL
FEARNPKGQAVISEIDGEVIDIREGKDRREIEVRGEAENKVYAAPYGSRIKVSVGVKLNA
GDELTEGSVDPKEMLKVRGMRGVSNYILQEVQKVYRMQGVEINDKHVEVMIRQMLRKLRV
IDSGDTDLLPGSYVEVPEFEQANAKVLMEGRNPAVGRPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKVDRLLGLKENVIIGKLVPAGTGMSRYRNVKVASQVDYEAELEAAKA
EQEAVSVE
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
gtgattgacgtgaacaacttcgaatatatgaagatcggcttggcttcccccgataagatc
cgttcgtggtctttcggggaagtgaagaagccagagacgatcaactaccgcacactgaaa
ccggaaaaagacggcttgttctgtgaacgcatctttggaccaaccaaggactgggagtgc
cattgcggtaaatacaagcgtgttcgttataaaggtgtagtgtgcgaccgttgtggcgtg
gaagtaacccgcgccaaagtacggcgtgagcgtatggggcacattgaactggctgcccca
gtttctcacatctggtacttcaaagggattccaagccgtatgggcttggtgctcgacatg
tcccctcgttccctggaggaagtaatctactttgcttcttacgtagttaccgatccaggt
gacactcctctcgataaaaagcaattgctctccgaaaaagagtatcgcaattatcgtgag
aaatacggccactccttccaagcgatgatgggagcagaagcgatcaaacgcctgcttgca
gaaatcgatttggataaagacgtggaaacgttaaaagaagatttgaaaacggcacaaggc
cagcgtcgcaaccgtgcgatcaagcgtctggaagtgctcgaggcattccgcaactccggt
aaccacccggattggatggttctcgacgtattaccggttatcccgccagagcttcgtcca
atggttcagttggatggtggacgttttgccacttccgacctgaatgacctgtaccgccgt
gtaatcaaccgtaataaccgtctgaagcgcctgctcgaactgggtgcgcctgacattatc
gtacaaaacgagaaacgcatgctgcaggaagcagtagacgcgctcatcgacaacggtcgt
cgtggacgtccggtaacaggaccaggtaaccgtcctttgaaatctctcagccacatgctg
aaaggtaaacaaggtcgtttccgtcaaaacctgctcggtaagcgtgttgactactccggt
cgttccgttatcgttgtaggacctaacctgaagatgtatcagtgcggtttgcctaaagaa
atggcactggagctcttcaagccgttcgtgatgaaagagctggtttccaaaggcctcgct
cacaacatcaagagcgcaaagcgcaaggttgagcgcgttcagccagaggtatgggacgtt
ctcgaggacgttattcgtgagcacccggtactgttgaaccgtgcccccaccttgcaccgt
ttgggtatccaggcgttcgaaccagttctggttgaaggccgtgcgatccgtctgcatccg
ctcgtttgtacagcgtacaacgcggacttcgacggtgaccaaatggcggttcacgttccg
ttgtctgctgaagcacaggcagaagcccgtatcctcatgctggcagcgcagaacatcttg
aacccgaaagacggtaaaccggtagtaacaccatcccaggatatggtgcttggttcttac
tacctgacgctagagcgcgaaggcgacaaaggcgagggtacgatttatcgcgatcctcac
gatgcgattgccgcttatcagcaaggctttatcagcttgcatacgcgtatcgttctgcca
gcgaaacgcctgaacaaaatcagctttactgagcgtcaagagaacgcactgatcgtaacg
acagttgggaaagtgatttttaacgagattttccctgctgatatgccgttcattaatgcg
ccaactcgagctaacctgcaaacgatggttccagatgagtgctttatttttgataaaggt
acgaatgtttctgagttcattaagaacctccctgatccaggggctgtaaaaaaaggcttc
ctaggtaccattatttccgagtgcttccgccgcttcggtacgatgaaaacgtccatgatt
ctcgacagaatcaaggaactgggcttcacgtactcgacgaaagcaggtatcacgattgcc
gtagcggacatcgcggtaccaggaaagaaaaaagacatccttgacgctgcagatgagaag
gtagcaactgttatgacgcaattccgtcgcggtttgatcaccgaggacgagcgctatgac
cgcgttatttccatctggtccaaagcgaaggatgaggtaacagaagttttgatgaagtcc
atggataagtttaacgcgatcttcatgatggcgaactccggtgcccgtggtaacgtatcc
cagatcactcagctggctggtatgcgcggtctgatggcgaacccatccggtcgaatcatc
gagttgccgattaaatccaactttcgtgaaggtctgacggtattggagtactttatctct
acgcacggtgcgcgtaaaggtctcgccgatacggccttgcgtacagcggactcgggttac
ctgactcgtcgtctggtggacgttgctcaagacgtgattgtacgcgaaaccgattgtgga
acagataaaggtatccgtgtaacagcgatcaaggatggtaaagaagagatcgagaagcta
tctgaccgtctgacaggacgtacttgcttcgagactttacgccaccctgagacaaaagaa
atcatcgtgcaccgcaatgaggagatctctgaagaggttgccgagtatatcgaaaaagtt
ggaatcactgacgtttacatccgtaacgtacttgcttgccgcaccagccacggtgtctgc
aaactgtgctacggacgcaacctggctacaggagccgaggtggaagtgggagaagcagtc
ggtattatcgctgcacaatccattggtgagccgggtacccagctgaccatgcgtaccttc
cataccggtggggttgcgggagacgatattacccaaggtttgccgcgtattcaagagttg
tttgaggcgcgcaatccgaaagggcaagcagtcatctccgaaatcgatggtgaagttatt
gatattcgcgaagggaaagatcgtcgcgagatcgaagtacgtggagaagcggagaacaaa
gtgtatgcagcaccgtatggctcgcgcatcaaggtttctgttggtgtcaagctgaatgct
ggtgacgagctcacagagggttccgtagacccgaaagaaatgctcaaagttcgcggtatg
cgcggcgtttcgaactacatcttgcaagaggtacaaaaagtttaccgtatgcaaggggta
gaaattaacgacaagcacgtagaggttatgattcgtcagatgctgcgcaagctgcgcgtt
atcgacagcggagatacagacctcttgccaggttcctatgttgaggttcctgaatttgag
caagcgaacgcaaaagttctcatggaaggcagaaatccagcagtgggtcgtccggttctt
ttggggatcaccaaagcatccctcgaaaccgactccttcctgtcggcagcatccttccag
gaaacgactcgcgttcttaccgatgcagcaatcaaaggaaaagtcgatcgcttgctaggt
ttgaaagagaacgttattatcgggaagctggttccagcaggtaccggtatgtcacgttac
cgcaatgtaaaagttgctagtcaagtagattacgaagcagagctggaagcagcgaaagct
gagcaagaagcagtttctgtagagtaa
DBGET
integrated database retrieval system
