Brevibacillus brevis: BBR47_11530
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Entry
BBR47_11530 CDS
T00879
Symbol
helD
Name
(GenBank) probable DNA helicase involved in recombination
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bbe
Brevibacillus brevis
Pathway
bbe03420
Nucleotide excision repair
bbe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BBR47_11530 (helD)
03430 Mismatch repair
BBR47_11530 (helD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbe03400
]
BBR47_11530 (helD)
Enzymes [BR:
bbe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BBR47_11530 (helD)
DNA repair and recombination proteins [BR:
bbe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BBR47_11530 (helD)
MMR (mismatch excision repair)
Other MMR factors
BBR47_11530 (helD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
Viral_helicase1
AAA_30
PhoH
AAA_16
nSTAND3
SLFN-g3_helicase
DEAD
ResIII
NACHT
T2SSE
Carbpep_Y_N
Motif
Other DBs
NCBI-ProteinID:
BAH42130
UniProt:
C0Z6H3
LinkDB
All DBs
Position
complement(1187864..1190224)
Genome browser
AA seq
786 aa
AA seq
DB search
MSVTDQDRQNEQQRVEQVISEIKNRIDDLKEHVNVVSEDIIGIRKHFWDDVTVNFEDAIE
AVETYASIKQQAEVLSERERIHRHAQNQLRTLQRLLQSPYFGRIDFQEELESKPEAIYLG
IASLLDKNDEEFLVYDWRAPISSLYYDYSPGPAEYNTPGGSVNGEITCKRQYIIRDGKLL
HLFDTGVTIGDELLQEVLGKQADSQMKSIVATIQRDQNRIIRNERSRLVIVSGAAGSGKT
SAALQRIAYLLYRYRKTLTAEQIVLFSPNSLFNSYVSTVLPELGEENMQQTTFQEYAEHR
LGDDFQLENPLEQMEYVLTASDQSGYEARLEGIRFKSSSLFLQAMDEYANSLKQAGIMFL
PVTFRDQTLISAAHIHELFYSLDTNLPIPNRMVLVAKSLLTELKKMEQRERSKPWVEDEM
ELLDRDSYVAAYQSLRRKKQFREDTFDDFEREQELLATWIVKKQFQPLRDFIRELQFIDT
RAIYRQLFLSPDLLGTLAPSTLQHDVLDKWPAVCEQTAERLEQQYLACEDIPPYLYLQER
LEGKQTNNLVRHVFLDEAQDYSAFQFALIKSLFPRAKMTVLGDWNQAIYAHAYHQNSFDA
VTSLFEHEETETFVLTKSYRSTYPIVLFTRQLLRNGKMIEPFMRDGRLPTLTKVTSPQAH
TDQIEARIRELTDRGHQTIAVITKTLEEAQIVHDALQERLPIRLIKPATLSFEKGILIIP
SYLAKGVEFDAVILYDASATCYGEESERKLFYTACTRAMHELHLYYSDEKSPFIDNVSPE
YYELFV
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgactgatcaagatcggcaaaacgaacaacaacgtgttgaacaagtcatctca
gagataaagaaccgaatagatgacctgaaagagcatgtgaatgtcgtgagcgaggatatc
atcggcattcgcaagcatttttgggacgacgtgacagtcaacttcgaggatgccattgaa
gctgtcgagacttacgccagtatcaagcagcaagcggaggtcctgtccgagcgtgaacgc
atccatcgccatgcccaaaatcagttgcgtacgctacagcgattgttgcaatctccctat
tttggcaggattgattttcaagaagagctggaatcgaagccagaagccatctaccttggc
attgcttctttgctggataaaaacgacgaggaatttctcgtttacgactggcgcgctccg
atctccagtctgtattatgactactcgccggggccagccgagtacaatactccaggcggt
agcgtaaatggagagattacgtgcaaaagacaatacatcattcgcgacggcaaattgctg
cacctgttcgatacgggcgtgacgattggcgacgagctgcttcaggaggtactcggcaaa
caggctgactcgcagatgaaaagcatcgttgccacgatccaacgggaccaaaaccgcatc
atccgcaatgaacgcagccgactcgtcatcgtctctggagccgccggtagcggaaaaacg
tctgcggcactgcaacgaatcgcttatttgttataccgttatcgcaaaacattgaccgca
gagcaaatcgtcttgttttcgcccaactctttgtttaacagctacgtctcgaccgttctt
cctgagctcggcgaggaaaatatgcagcaaacgacttttcaggaatacgcggagcatcgt
ctcggtgacgacttccaactggaaaatccgcttgaacagatggagtatgtactgacagca
agtgatcagtctggatatgaggcgcggctggaagggatccgtttcaaatcaagctccttg
tttttgcaggccatggatgaatacgcgaatagcttgaaacaagctggaattatgtttctc
cctgttacatttagggaccagacactaatcagtgcggctcacatccatgaattgttttat
tctctcgatacgaatctgcctatccccaatcggatggtactcgttgcaaaatcacttctg
acagagctaaaaaaaatggaacagcgcgaacgatcaaagccatgggtagaagatgaaatg
gagctgcttgaccgagattcgtatgtagctgcctatcaatcgctgcgccgcaaaaagcag
tttcgggaggataccttcgatgacttcgaacgcgagcaggagctcttagccacatggatc
gtcaaaaaacagtttcagcctctgcgcgattttatccgggagctccaatttattgatact
cgcgctatttaccgccagctctttttatcacctgacttgctcgggacgcttgcgccaagc
actctccaacacgatgtattagacaagtggccagcagtgtgcgaacagacagcagagcgt
ttagagcaacagtatttggcatgtgaagacatccctccttatttgtatttgcaggaacga
ttggagggcaagcagacgaacaacctcgtccgtcatgtctttctcgatgaagcccaagac
tactccgcctttcagttcgctctcatcaagagcttgtttccccgtgccaaaatgaccgtg
ctgggagactggaatcaggcgatttacgcccatgcgtatcaccaaaatagctttgatgct
gtcacatccctgtttgagcacgaagagacggagaccttcgtcctgaccaaaagctaccgc
tccacctatcccatcgtcttgtttacgcggcaactattgcgaaacgggaagatgattgag
ccttttatgcgcgatggtcgcttgccaactctaaccaaagtgacatcccctcaggctcat
accgatcaaatcgaagcacgcatacgtgagctcactgatcgtggtcatcagacgatcgct
gttatcacaaaaacgctagaggaagctcaaatcgttcatgacgctttgcaagagagattg
ccgattcgcttgatcaagcccgctactctttcctttgagaaaggaatcttgatcattccc
tcttacttggcaaaaggagtcgagttcgatgcggtcatcctttatgatgcttccgctaca
tgctatggcgaagaaagtgaacgcaagcttttttacacggcatgtacacgtgccatgcat
gagctgcacctttactattcggatgaaaaaagtccatttatagataacgtttctcctgag
tattacgagctgtttgtttaa
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