KEGG   Brevibacillus brevis: BBR47_11530
Entry
BBR47_11530       CDS       T00879                                 
Symbol
helD
Name
(GenBank) probable DNA helicase involved in recombination
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
bbe  Brevibacillus brevis
Pathway
bbe03420  Nucleotide excision repair
bbe03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bbe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BBR47_11530 (helD)
   03430 Mismatch repair
    BBR47_11530 (helD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bbe03400]
    BBR47_11530 (helD)
Enzymes [BR:bbe01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BBR47_11530 (helD)
DNA repair and recombination proteins [BR:bbe03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BBR47_11530 (helD)
   MMR (mismatch excision repair)
    Other MMR factors
     BBR47_11530 (helD)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C UvrD_C_2 AAA_19 Viral_helicase1 AAA_30 PhoH AAA_16 nSTAND3 SLFN-g3_helicase DEAD ResIII NACHT T2SSE Carbpep_Y_N
Other DBs
NCBI-ProteinID: BAH42130
UniProt: C0Z6H3
LinkDB
Position
complement(1187864..1190224)
AA seq 786 aa
MSVTDQDRQNEQQRVEQVISEIKNRIDDLKEHVNVVSEDIIGIRKHFWDDVTVNFEDAIE
AVETYASIKQQAEVLSERERIHRHAQNQLRTLQRLLQSPYFGRIDFQEELESKPEAIYLG
IASLLDKNDEEFLVYDWRAPISSLYYDYSPGPAEYNTPGGSVNGEITCKRQYIIRDGKLL
HLFDTGVTIGDELLQEVLGKQADSQMKSIVATIQRDQNRIIRNERSRLVIVSGAAGSGKT
SAALQRIAYLLYRYRKTLTAEQIVLFSPNSLFNSYVSTVLPELGEENMQQTTFQEYAEHR
LGDDFQLENPLEQMEYVLTASDQSGYEARLEGIRFKSSSLFLQAMDEYANSLKQAGIMFL
PVTFRDQTLISAAHIHELFYSLDTNLPIPNRMVLVAKSLLTELKKMEQRERSKPWVEDEM
ELLDRDSYVAAYQSLRRKKQFREDTFDDFEREQELLATWIVKKQFQPLRDFIRELQFIDT
RAIYRQLFLSPDLLGTLAPSTLQHDVLDKWPAVCEQTAERLEQQYLACEDIPPYLYLQER
LEGKQTNNLVRHVFLDEAQDYSAFQFALIKSLFPRAKMTVLGDWNQAIYAHAYHQNSFDA
VTSLFEHEETETFVLTKSYRSTYPIVLFTRQLLRNGKMIEPFMRDGRLPTLTKVTSPQAH
TDQIEARIRELTDRGHQTIAVITKTLEEAQIVHDALQERLPIRLIKPATLSFEKGILIIP
SYLAKGVEFDAVILYDASATCYGEESERKLFYTACTRAMHELHLYYSDEKSPFIDNVSPE
YYELFV
NT seq 2361 nt   +upstreamnt  +downstreamnt
atgagcgtgactgatcaagatcggcaaaacgaacaacaacgtgttgaacaagtcatctca
gagataaagaaccgaatagatgacctgaaagagcatgtgaatgtcgtgagcgaggatatc
atcggcattcgcaagcatttttgggacgacgtgacagtcaacttcgaggatgccattgaa
gctgtcgagacttacgccagtatcaagcagcaagcggaggtcctgtccgagcgtgaacgc
atccatcgccatgcccaaaatcagttgcgtacgctacagcgattgttgcaatctccctat
tttggcaggattgattttcaagaagagctggaatcgaagccagaagccatctaccttggc
attgcttctttgctggataaaaacgacgaggaatttctcgtttacgactggcgcgctccg
atctccagtctgtattatgactactcgccggggccagccgagtacaatactccaggcggt
agcgtaaatggagagattacgtgcaaaagacaatacatcattcgcgacggcaaattgctg
cacctgttcgatacgggcgtgacgattggcgacgagctgcttcaggaggtactcggcaaa
caggctgactcgcagatgaaaagcatcgttgccacgatccaacgggaccaaaaccgcatc
atccgcaatgaacgcagccgactcgtcatcgtctctggagccgccggtagcggaaaaacg
tctgcggcactgcaacgaatcgcttatttgttataccgttatcgcaaaacattgaccgca
gagcaaatcgtcttgttttcgcccaactctttgtttaacagctacgtctcgaccgttctt
cctgagctcggcgaggaaaatatgcagcaaacgacttttcaggaatacgcggagcatcgt
ctcggtgacgacttccaactggaaaatccgcttgaacagatggagtatgtactgacagca
agtgatcagtctggatatgaggcgcggctggaagggatccgtttcaaatcaagctccttg
tttttgcaggccatggatgaatacgcgaatagcttgaaacaagctggaattatgtttctc
cctgttacatttagggaccagacactaatcagtgcggctcacatccatgaattgttttat
tctctcgatacgaatctgcctatccccaatcggatggtactcgttgcaaaatcacttctg
acagagctaaaaaaaatggaacagcgcgaacgatcaaagccatgggtagaagatgaaatg
gagctgcttgaccgagattcgtatgtagctgcctatcaatcgctgcgccgcaaaaagcag
tttcgggaggataccttcgatgacttcgaacgcgagcaggagctcttagccacatggatc
gtcaaaaaacagtttcagcctctgcgcgattttatccgggagctccaatttattgatact
cgcgctatttaccgccagctctttttatcacctgacttgctcgggacgcttgcgccaagc
actctccaacacgatgtattagacaagtggccagcagtgtgcgaacagacagcagagcgt
ttagagcaacagtatttggcatgtgaagacatccctccttatttgtatttgcaggaacga
ttggagggcaagcagacgaacaacctcgtccgtcatgtctttctcgatgaagcccaagac
tactccgcctttcagttcgctctcatcaagagcttgtttccccgtgccaaaatgaccgtg
ctgggagactggaatcaggcgatttacgcccatgcgtatcaccaaaatagctttgatgct
gtcacatccctgtttgagcacgaagagacggagaccttcgtcctgaccaaaagctaccgc
tccacctatcccatcgtcttgtttacgcggcaactattgcgaaacgggaagatgattgag
ccttttatgcgcgatggtcgcttgccaactctaaccaaagtgacatcccctcaggctcat
accgatcaaatcgaagcacgcatacgtgagctcactgatcgtggtcatcagacgatcgct
gttatcacaaaaacgctagaggaagctcaaatcgttcatgacgctttgcaagagagattg
ccgattcgcttgatcaagcccgctactctttcctttgagaaaggaatcttgatcattccc
tcttacttggcaaaaggagtcgagttcgatgcggtcatcctttatgatgcttccgctaca
tgctatggcgaagaaagtgaacgcaagcttttttacacggcatgtacacgtgccatgcat
gagctgcacctttactattcggatgaaaaaagtccatttatagataacgtttctcctgag
tattacgagctgtttgtttaa

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