Brevibacillus brevis: BBR47_33970
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Entry
BBR47_33970 CDS
T00879
Name
(GenBank) probable ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bbe
Brevibacillus brevis
Pathway
bbe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BBR47_33970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbe03019
]
BBR47_33970
03009 Ribosome biogenesis [BR:
bbe03009
]
BBR47_33970
Enzymes [BR:
bbe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BBR47_33970
Messenger RNA biogenesis [BR:
bbe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BBR47_33970
Ribosome biogenesis [BR:
bbe03009
]
Prokaryotic type
rRNA helicases
BBR47_33970
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
RelE
CMS1
Motif
Other DBs
NCBI-ProteinID:
BAH44374
UniProt:
C0ZF15
LinkDB
All DBs
Position
complement(3605016..3606605)
Genome browser
AA seq
529 aa
AA seq
DB search
MTIFSDFPLHKSILQAIHDMGFEEPSPIQAACIPKVLDGGDLIGQAQTGTGKTAAFGIPL
VEKITPANRVQAIVLTPTRELAIQVAGELLRISKYNKVRTLPIYGGQSIGHQIRALRQGV
QIVVGTPGRVMDHLRRKTLKLDHVHTLVLDEADEMLDMGFIEDIETIINHMPDERQTLLF
SATMPPEIKRLATRYMKQPQTIAVSREEVTAPLIEQVYYKVFDRNKVESLCRILDSEDVE
LGIIFCRTKRGVDELSEVLQSRGYLADGLHGDLSQAQRDKVMNAFREGSIEFLIATDVAA
RGIDVGNVSHVINYDIPQDSESYVHRIGRTGRAGRKGIAMTLVTPREVRQMMFIQKQTKA
QVLSRNVPSLEEVAERKQEQLREQLTSLLESDAIADMYQKVADALVGQYPAEKVAAAALH
LAFHTEAGQGQEAEAYNFGETGAAKGMVRFFLNVGRNANMKPQDLVREISESVGIPGKSV
GRIDIFESFTFVEVPEEVAAFVYESLRQTRINGKRINLEPAKPRGAKRS
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgacgattttttctgattttcctttacataaatctattctgcaagcgattcacgatatg
ggcttcgaggagccatcaccgattcaggcagcttgcattccaaaagttttggatggcgga
gacctgattggtcaagcacagacagggactggtaagactgctgccttcgggattccactt
gtagaaaagattacacctgccaatcgtgtacaagcgatcgtgttgactccgactcgtgag
ttggctattcaggtagcaggagagctcttgcgtatctccaaatacaacaaggttcgtacg
ctgccaatctatggtggacaatcgatcggacatcaaattcgtgcactgcgccaaggtgta
caaatcgttgtaggtactcctggccgtgtcatggaccacttgcgtcgcaaaacattgaag
ctggatcacgtacatacactcgttttggatgaagcggatgaaatgctggacatgggcttc
atcgaagatatcgagacaatcatcaatcatatgccagatgagcgtcaaaccttgctgttc
tctgcgacgatgccgccagaaatcaagcgtttggctacccggtacatgaaacagccgcaa
acgattgcggtgagccgtgaagaagtaacggcgccattgatcgaacaggtatactacaaa
gtgtttgaccggaataaagtggagagcctctgccgcatcttggacagtgaggatgttgag
ctgggtatcattttctgccgtactaagcgcggtgtagatgagttgtccgaagtgctgcaa
tcccgcggataccttgcggacggcttgcatggcgatttgtcccaggcacaacgtgacaag
gtcatgaatgcgttccgtgagggatcgattgaattcctgatcgcgacggatgtagcagca
cgtggtatcgacgtaggaaacgtctctcacgtaatcaactacgatattccacaagactct
gagagctacgtacaccgtattggccgtactggtcgtgcaggtcgcaaaggaattgcgatg
acgttggttacgcctcgtgaagtaagacaaatgatgtttatccaaaagcagacaaaagca
caagtgctctctcgcaatgttccttctttggaggaagtggctgagcgcaaacaagaacaa
ttgcgtgaacagttgactagccttttggaaagcgatgcaatcgcggatatgtatcaaaaa
gtagcggatgctctcgtaggtcaatacccggctgaaaaagtagctgctgctgcattgcac
ctggcattccatacggaagcgggacaagggcaggaagcagaagcgtacaactttggtgag
acgggtgcagcaaaaggcatggttcgcttcttcctgaacgtaggtcgcaatgcgaacatg
aagccgcaggatctggtacgagagatctctgaatctgttggtatcccaggaaaatcagta
ggtcgcatcgacattttcgagagcttcacgtttgttgaggttccagaagaggttgcggca
ttcgtatatgagtcactgcgtcaaacccgaatcaatggaaaacgaatcaatctggagcct
gcaaagcctcgcggagcgaagcgttcctaa
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