Brevibacillus brevis: BBR47_48880
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Entry
BBR47_48880 CDS
T00879
Symbol
yhdL
Name
(GenBank) probable anti-sigma-M factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
bbe
Brevibacillus brevis
Brite
KEGG Orthology (KO) [BR:
bbe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbe03021
]
BBR47_48880 (yhdL)
Transcription machinery [BR:
bbe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BBR47_48880 (yhdL)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma_reg_C
Sigma_reg_N
DUF3464
Motif
Other DBs
NCBI-ProteinID:
BAH45865
UniProt:
C0ZL38
LinkDB
All DBs
Position
complement(5139028..5140203)
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AA seq
391 aa
AA seq
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MNTEKNQREQRLLAYLRGEMTAEDSKQFEEEIAADEEYAQRLERLLLGEETEEDNEKTKQ
SETLSAEKQRAIVRRGKWKNRLSNAGFTIGLPFLAGVVLLILNGWVGSLMHEDLFRVAKS
MVNFTQPGVRVGGSGSQVGLLYGNISMELSERVGGEEKNAGRFESTNVLWNVNAKPQWTN
GVREQKLFFRYPAEEETEDTMSLTSAAWTTMEKLPEGTVSQLAISFDHFLTYEEYYKLVT
RHVTSSGQDTVWLAIDTGVELKQAESGDVLFGSGEVWGFAQREMDYGGVYKKGDGDRVIA
NYLEEMSYLSEQEELARDIGRSLLPGRDLQIAERYSHIQKYGVRIYGAVLTGPTKELLKL
KAEKSITAAFLGKVDWWNWERPEASGTQYSY
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgaacacggagaagaatcaacgcgagcaaaggttgcttgcttatttgcgtggagaaatg
acggcagaggattcgaaacaattcgaggaagaaatagccgctgacgaagagtacgcacag
cgattggaaaggcttttgttgggggaagaaacagaagaggacaacgagaaaaccaaacag
tctgaaacactgtcagctgaaaaacagcgtgccattgttcgccgggggaaatggaaaaat
cggttgtccaacgcaggattcaccatagggcttccctttctggcgggagttgtgctgctg
attttgaatggctgggttgggtcgctgatgcatgaagacctgttccgcgttgcgaagtcg
atggtcaattttactcagccaggtgtgagagtgggggggagtggttcacaggtcggattg
ctgtacggaaacatcagcatggaactaagcgagcgggttgggggagaggaaaagaatgcg
ggtcgttttgagagtacgaatgtgctgtggaatgtgaatgccaagccgcaatggacgaac
ggggtcagggagcaaaagttgtttttccgttatccggcagaggaggaaacggaggatacc
atgtctctcacctcagctgcctggacgacaatggagaagctgcccgaaggaacggtttcg
cagcttgcgatatcttttgaccactttctgacgtacgaggagtattataagctggttacc
cgccatgttacctcttcaggtcaagatacagtctggcttgcaatagatacaggggtagag
ctcaagcaagctgaaagcggagatgtgctttttggttccggggaagtgtggggatttgcc
cagcgagaaatggattacggtggtgtatataaaaaaggggatggggacagagtaatcgca
aactatctggaggagatgagttatttgtcagagcaagaggaactggctcgtgatatcgga
agatccttactccctggcagagatctacagattgcagagcgatacagtcacatacagaaa
tacggggttcgcatctacggagccgtcctcaccggacctacgaaagaactgctgaagctc
aaggcagaaaagtcgataacagcagcgtttttaggcaaggtagactggtggaattgggag
cgacctgaggcatccggaacacaatacagctattga
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