Branchiostoma belcheri (Belcher's lancelet): 109462002
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Entry
109462002 CDS
T07532
Name
(RefSeq) pre-mRNA-splicing factor 38B-like isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
bbel
Branchiostoma belcheri (Belcher's lancelet)
Pathway
bbel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109462002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbel03041
]
109462002
Spliceosome [BR:
bbel03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
109462002
Complex C
U4/U6.U5 tri-SnRNP related factors
109462002
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
109462002
NCBI-ProteinID:
XP_019614043
UniProt:
A0A6P4XTR9
LinkDB
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Position
Unknown
AA seq
454 aa
AA seq
DB search
MPQSNVLPLWGNDKTMNLNSLILTNIQSSPYFKNDLFQLKTYHEVIDEIYYKVQHLEPWE
KGSRNTGGQTGMCGGVRGVGAGGIVSTAYCLLYKLFTLKLTRKQVNGLLQHGDSPYIRGL
GFMYIRYTQPPADLWEWYEPYIDDDEELDVKAGTGCVMTVGEMLRSFLGKIEWFSTLFPR
IPVPIQKDLEGKLASRPLLRKRPAAPEEEEEAAEHIPDEEVSWGEAERRSRARRSRSSSR
DAPKPASRTSSPAQKRRTDFERDLDRERDRQRREKERPRSRSSDRPRQRSRSREKKRSKS
QEKHSPSKGRDSRRDRRRSRSRERSNRDRRRSRSRDKKHSRSQDRDGGRRDADRRSRERR
HRSRSHDRAGSRHKDGSGGRSAEYRDISSRKEKEGKKPRKDRESRERHRDRKRSRSRSKE
HSSHKHSRGDDKRNTHHDNDVEEGQLEETVQNSS
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaaagcaacgtgcttcctttgtggggcaacgataaaaccatgaatctgaactcc
ttaatcctcaccaacatccagtcttctccctacttcaagaacgacttgttccagctcaag
acgtaccacgaagtcatagacgagatttactacaaggtccaacaccttgagccatgggag
aagggcagccggaacacgggtggacagactggcatgtgcgggggggtgcgaggtgtggga
gcaggaggtattgtgtccacagcgtactgcctgctgtacaaactcttcaccctgaagctg
acgaggaaacaggtgaacgggctgctccaacacggagactccccctacatccgagggctc
ggattcatgtacatcagatacacccaaccccccgcggacctgtgggaatggtacgagcca
tacatagatgatgacgaggagttagatgtgaaggcaggtacaggctgtgtgatgacagta
ggagagatgctgcggagcttcctggggaagattgagtggttctccacgctgttcccccgc
atcccggtacccatccagaaggacctggaggggaagctggcctcccgaccgttgctacgg
aaacgccccgccgcccccgaggaggaggaggaggctgcggaacacatccctgatgaggag
gtatcgtggggcgaggccgagcgccgatcacgggcaaggcggagcagatcttccagcagg
gatgcgccgaagccggcctcccgcacgtccagcccagcacagaagagaagaacagacttc
gagcgtgacctggaccgcgagagagaccgccagcgccgcgagaaggaacgcccgcgcagc
cgcagctccgaccgaccgcggcagcgaagccgcagcagggagaaaaaacgcagcaagagc
caggagaaacactcaccgagcaagggcagggacagccggagggacagacggcggtcgcga
agcagggagcgcagcaacagggacaggaggcggtcacgcagccgagacaagaagcattcc
cgcagccaggaccgggacggcggccggcgcgacgcagaccggcgcagcagggagaggagg
caccggtcacgcagccacgaccgcgccggctccaggcacaaggacggcagcggcgggcgc
tcggcggagtacagagacatttcctcacggaaggagaaggaggggaagaagccgaggaaa
gaccgggagtcgagagagagacacagggacaggaaacggagccgctcacgaagcaaggag
cactcctctcacaaacacagccggggggacgacaagcgaaacacgcaccacgacaacgat
gtagaggaaggacagttagaggagactgtacagaattccagctag
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