Branchiostoma belcheri (Belcher's lancelet): 109462178
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Entry
109462178 CDS
T07532
Name
(RefSeq) exosome complex component RRP4-like
KO
K03679
exosome complex component RRP4
Organism
bbel
Branchiostoma belcheri (Belcher's lancelet)
Pathway
bbel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109462178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbel03019
]
109462178
Messenger RNA biogenesis [BR:
bbel03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
109462178
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
109462178
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
ECR1_N_2
RRP40_S1
Lantibiotic_a
Motif
Other DBs
NCBI-GeneID:
109462178
NCBI-ProteinID:
XP_019614235
UniProt:
A0A6P4XCI0
LinkDB
All DBs
Position
Unknown
AA seq
291 aa
AA seq
DB search
MAVHITLTESRKKTAVPDAPKHLVTPGDVITADTGYMRGHGTYMDDDKLKASLAGVVERV
NKLICVQPLKTRYNGEIGDVVVGRVSEVGQKRWRVDVNSRLDAILMLSAVNLPGGELRRR
SAEDELMMREYLQEGDLISAEVQAIFHDGALSLHTRSLKYGKLAQGVMVQVSPSLVKRRR
THFHNLACGASVILGNNGYVWISPTVNNERGESSGGYEQDLEPVPSADREVIARQRNCIL
ALATHKLMLYDTSVLYAYEASRQYQVKDLLQPDVAEKVADDTRQRLQMESG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcacatcacgttgacggagagccgtaagaagacggcggtacctgacgcgccg
aaacacctggtgacgccgggcgacgtcatcacggcggacacgggatacatgaggggccat
ggcacgtacatggatgatgacaagctgaaggcctccctggctggagttgtggagagagtc
aacaaactcatctgtgtgcagccgctcaagacaaggtacaatggtgagattggtgatgtg
gtggtggggagagtcagcgaggttggccagaaaagatggcgggtagatgttaactccaga
ctagatgccattctgatgttgtcagcagtcaacctccccggaggagagttgaggagaagg
tcagctgaggacgaactgatgatgagagagtacctccaggaaggggacctcatcagtgct
gaagtgcaggccattttccatgatggagcactttctcttcacaccaggagtctcaagtat
ggcaagctagcccagggagtgatggtacaggtgtccccgtcgctggtgaagcggcgtagg
actcatttccacaacctggcctgcggggccagcgtcattctggggaacaacggctacgtc
tggatcagtccaactgtcaacaacgagaggggggagagtagcggggggtatgagcaggat
ctggagcctgttccatcggcagacagggaggtgatagcccggcaaagaaactgtatcctg
gccttggccacccacaaactcatgttgtacgacacaagtgtactgtacgcgtatgaagct
tcgcgtcagtatcaggtgaaggaccttctgcagcctgatgtagcagagaaggttgcagat
gacaccagacagagactacagatggagtcaggatga
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