Branchiostoma belcheri (Belcher's lancelet): 109462742
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Entry
109462742 CDS
T07532
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
bbel
Branchiostoma belcheri (Belcher's lancelet)
Pathway
bbel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109462742
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbel03019
]
109462742
Messenger RNA biogenesis [BR:
bbel03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109462742
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109462742
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5646
Motif
Other DBs
NCBI-GeneID:
109462742
NCBI-ProteinID:
XP_019614868
UniProt:
A0A6P4XS24
LinkDB
All DBs
Position
Unknown
AA seq
797 aa
AA seq
DB search
MADKRKLQGEIERCLKKVSEGVETFEDIWQKVNNATNSNQKEKYENDLKKEIKKLQRLRD
QIKTWVASNDIKDKRQLLENRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
RDDTIQWLTDSIERLTLQVDQFESEVEAVQASSKKKKLDKDKQGRVDELKNLLERHRYHI
KQLETLLRMLDNSAVEVEQIKNIKDEVEYYIEASQDPDFEENEYLYDDFDMEEMGRYNHG
LEDPEKNLGTIIATSPSEIGLMSDEVFDKEKANAEQAVELSNSSSPTPNSPSTNHSKEKD
DKKERSKSTDEPVKPVATRSSSLPSSSSTTTTANGSKTPSKSASISSSASNHIVATPPAG
PAYAAAAAGQTSTENSNHASGPAWSAVTAHHNETSPSGTAQQPRPPVTPPTAISKPQQRI
TDGQLSEATANSLNHTVGSVPSSVAPTPPVNSAPGPIVSQTPTPMTIAANSVTSTKDLAS
LGLANMSSAATTSATMSAPSTPGKSEPLMNGPSSLNAAEYKFSQITTNLLFLFGQDQQSS
ESLTSLKSMAEKAVVNAGLEEHLQTQQFSTDDTGAFSSGSAVPTTPTLSDSGRLAKISSL
FSSTTTTTTDSQASVVPPPTTEAHLQPILGVAPLGPVPLSKDNVYGLGMLEASYHHMPHP
SDSEKLRKSRGLLVSVVSRQYLPRNPCPTPPYYPQHPLPHSDSLEFFTRLSTETLFFIFY
YLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEYEQGTYIYFDYEKWGQRK
KEGFTFEYRYLEDRDLQ
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaaagaaaattgcaaggtgagatcgagagatgcctgaagaaggtcagtgaa
ggtgtagaaacctttgaagacatctggcaaaaggtgaacaatgcaaccaactccaaccag
aaggagaaatatgagaacgaccttaagaaagaaatcaagaaactgcagcggttgagagac
cagatcaaaacatgggtagcatcaaacgacatcaaggacaaaaggcagctgctggagaac
agaaaactcattgaaacacaaatggaaagatttaaggtggtggaaagggagaccaaaaca
aaagcgtactcgaaggaaggtttggggctggcgcagaaagtagacccagcgcagaaagag
agagacgacacaatacagtggttaacggattccatcgagagactaacactgcaggtggac
cagttcgagagtgaagtcgaggctgtccaagcgtcgtccaagaaaaagaaacttgataag
gataaacagggaagagtagatgagttgaaaaacctgttggagaggcataggtaccacatc
aagcagttggaaacactcttaagaatgttggacaacagcgcggtggaggtcgaacaaata
aaaaacatcaaggacgaggttgagtactacatcgaagcatcgcaggatcctgactttgag
gaaaatgagtacctatatgatgattttgatatggaagaaatgggtaggtataaccatgga
ctagaagaccctgagaagaacctaggcacaatcatcgcgacgtcgccgtcggagatcggt
ctcatgtcggacgaggttttcgacaaggaaaaggcgaacgcagagcaggcggtggagctg
tccaactcgagttccccaacgcccaacagtcccagcaccaaccattccaaggagaaggac
gacaagaaggagagaagcaagtctacggacgagccggtgaaacctgtagctacaagatca
tcctcgttgccaagttcctcttcaacaacaacaactgcaaacggcagcaagactcccagc
aaatctgcaagcatttcgtcctcagcaagcaatcacattgtagcgacgccccctgctggg
ccggcgtatgctgcagctgcggcaggacagaccagtacagagaacagtaaccacgcgtca
ggcccggcatggtccgcagtcactgcacaccataatgagacatcaccatcaggtacagca
cagcagcctaggccacccgtcacaccgccaacagccatctccaaaccgcagcagagaata
acagatgggcagctatcagaagcgacagcaaacagcttgaaccacactgtgggctctgtc
ccgagtagtgttgccccgacgccacccgtcaactctgcgcctggtcccatcgtcagccaa
acgcccacaccgatgaccattgctgctaacagtgttacctcaaccaaagaccttgcatcg
ctagggctggccaacatgtcgtcagctgccaccacgtcggccaccatgtctgctccatcc
acacccggcaagtctgagcccctcatgaacgggccatcatcgctcaacgctgccgagtac
aagttttcacagataaccaccaatttgctgttccttttcggacaggaccagcagtcttca
gaatcgctgacgtcgttgaaaagcatggcggagaaggcggtggtaaacgcagggttggag
gagcacttacagacacagcagttcagtactgacgacacaggagccttcagcagcggtagt
gcagtacccacaacaccaaccctctcagactctggcaggctagcgaaaatctcatccctg
ttcagcagcacaacgacaacaacgacagactcgcaggccagcgtcgtgccgccgcccacc
acagaagcccaccttcagcccatcctgggtgtggcgcctctcggccccgtgccactcagt
aaggacaacgtgtacggcctgggcatgctagaggcctcctaccaccacatgcctcacccg
tccgactccgagaagctaagaaagtcaagaggattattggtctctgttgtttccagacaa
tacctgcccagaaacccgtgccccacaccgccttactacccccagcacccgctgcctcac
tcggacagcctggagttcttcaccagactatccacagaaactctcttctttattttctac
tacttagagggtacgaaggctcagtacctagcagctaaggcgttgaagaagcaatcgtgg
aggttccacaccaagtacatgatgtggttccagaggcacgaggagcccaaaacaatcacg
gatgagtatgaacagggcacgtacatctattttgactacgagaagtggggccaacggaag
aaggaggggttcacctttgagtaccggtacttggaggacagggacttgcaatga
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