Branchiostoma belcheri (Belcher's lancelet): 109463833
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Entry
109463833 CDS
T07532
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1-like
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
bbel
Branchiostoma belcheri (Belcher's lancelet)
Pathway
bbel03020
RNA polymerase
bbel03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bbel00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
109463833
09124 Replication and repair
03420 Nucleotide excision repair
109463833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbel03021
]
109463833
03400 DNA repair and recombination proteins [BR:
bbel03400
]
109463833
Enzymes [BR:
bbel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
109463833
Transcription machinery [BR:
bbel03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
109463833
DNA repair and recombination proteins [BR:
bbel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
109463833
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
DUF2420
Motif
Other DBs
NCBI-GeneID:
109463833
NCBI-ProteinID:
XP_019616270
UniProt:
A0A6P4XIA2
LinkDB
All DBs
Position
Unknown
AA seq
1986 aa
AA seq
DB search
MPVFGPILSDTSAPLRPVKRVQFGILSPDEIKRMSVTEGGIRYSEMMEGGRPKLCGLMDP
RQGVIDRSARCQTCAGNMAECPGHFGHIELAKPVFHIGFLTKTIKIMRCVCFFCSKLLVS
PDDPRIKDIVGKSKGQPKKRLTHVYDLCKGKMICEGGDEVDAEVGPEEGKEEKPKGHGGC
GRYQPQIRRVGLDLTAEWKHVNEDSQERKIQLSAERVLEIFKRISDEECSIMGMDPRFAR
PDWMVVTVLPVAPLQVRPSVVMFGAARGQDDLTHKLADIVKINNQLKRNEMNGAAAHIIA
EDTKMLQFHVTTLVDNEVPGMPRAVQKSGRPLKSVKQRLKGKEGRIRGNLMGKRVDFSAR
AVITPDPNLQIDQVGCPRTVAQNLTFPEIVTPFNIDRMQELVRRGANQYPGAKYIIRDTG
HRIDLRYHPKPSDLHLQCGYKVERHIRDDDIVIFNRQPTLHKMSMMGHRVKILPWSTFRL
NLSVTTPYNADFDGDEMNLHVPQSVETRAEIMELAMVPRMIITPQSNRPVMGIVQDTLTA
VRKFTRRDVFIDRESMMNLLMWLPTWDGKMPQPAILKPKPLWTGKQLFSLIIPGHINCIR
MHSTHPDEEDSGPYKWISPGDTKVIVENGELISGILCKKSLGPSGGSLVHIVALELGHEI
AKLFYGYIQTVVNNWLLLEGHTIGIGDCIADTQTYQDIQNTIKKAKLDVIEVIEKAHNDE
LEPTPGNTLRQTFENQVNRILNDARDKTGGSAQKSLSEFNNFKSMVVAGSKGSKINISQV
IACVGQQNVEGKRIPFGFRHRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFFFHAMGGR
EGLIDTAVKTSETGYIQRRLIKAMESVMIAYDGTVRNSNRHLVQLRYGEDGLDAVSIEFQ
NLATLKPSNRSFEKKFKLDYQNERYLRRILQEDIVREITSDARLQTEIEAEFEQLRVDRD
VLRSVNQTGDAKVALPCNLARIIWNAQKIFHVNTRAPTDLHPIKVVEGVRELSKKLVIVK
GDDPISIQAQANATILFNTLLRSTLCTRRVLEEFRLSTEAFDWLLGEIESRFNQAIVQPG
EMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKKPKTPSLTVFLL
GQPANDAEKAKDILCRLEHTTLRKVTANTAIYYDPDPQNTVIEEDQEFVNVYYEMPDFDP
HRISPWLLRIELDRKRMTDKKLTMESIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIMNN
DDSKMMDEEEMVDKMDDDVFLRCIEANMLTDMTLQGIEQIAKVYMHLPQQDSKKRIIITD
EGEYKALQEWILETDGVNLMKVLSEKNVDPVRTTSNDIVEIFQILGIEAVRKAIEKEMNH
VISFDGSYVNYRHLALLCDIMTQKGHLMAITRHGINRQEVGPLMKCSFEETVDILMESAS
HSETDYMWGVSENIMLGQLARIGTGSFDLMLDAEKCKYGMEIPTNLVGGGLMAGPGPGMF
FGNAGSPTASMSPQMTPWQQVGTPAYGGAWSPGLGSGMTPGAAGFSPSAASDASGMSPAG
YSPAWSPTPGSPGSPGPASPYIPSPGGPMSPSYSPASPAYMPRSPGGMTPQSPGYSPTSP
SYSPTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP
TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS
YSPTSPNYTPTSPKYSPTSPSYSPTSPSYSPASPSYSPTSPSYSPSSPNYSPQSPSYSPS
SPSYSPSSPKYSPTSPSYSPTSPQYTPTSPKYSPTSPKYSPSSPKYTPTSPKYSPSSPKY
SPSSPKYSPTSPTYSPSSAKYSPASPSYSPSTPKYTPTSPKYSPASPTYTPTSPKYSPTS
PSYTPDTPKYSPTSPKYSPTSPTYSPTSPKGSTYSPTTPGYSPASPTYSPESPESQATHE
EEEDES
NT seq
5961 nt
NT seq
+upstream
nt +downstream
nt
atgcctgttttcgggcccatcctcagcgacacttcggcgcctttgcgcccggtgaaaaga
gtccagttcggcatcctgagcccggacgaaattaaacggatgtcggtcacagaaggcgga
atccggtactccgagatgatggagggagggcggccgaagctctgcggtctgatggaccct
cggcagggcgtgatcgaccgctccgccaggtgtcagacctgcgccggcaacatggcggag
tgtcccggacacttcggacacatcgaactggccaagccggtgttccacatcggctttctg
accaagaccatcaagatcatgagatgtgtgtgcttcttctgctccaaactgttagtcagt
ccagatgacccaagaatcaaggacatcgtgggcaagtcgaagggccagcccaagaagcga
ctgacgcacgtgtacgacctgtgcaagggcaagatgatctgtgaaggaggggacgaggtg
gacgctgaagtcggtcctgaggagggaaaggaagagaagcccaagggtcatggtggttgc
ggtcgttaccagccccagattcgcagggtggggttggacctgacagcggagtggaaacat
gtcaacgaggactcccaagaacggaaaatccagctcagcgccgagagagtactggaaatc
ttcaaacgcatctctgatgaggagtgtagcatcatgggaatggatccgaggttcgcccga
ccagactggatggttgtgacggtacttcccgtggcgccgctacaagtccgaccctcggta
gtcatgtttggtgcagccagaggacaggatgatttgacgcacaagttggctgacatcgtg
aagatcaacaaccagctgaagcggaacgagatgaacggagcggcggctcacatcatcgcg
gaggacaccaagatgctgcagtttcacgtcacaacactggtggacaacgaggtccccggc
atgcccagggctgtacaaaagtcaggacgaccgctcaagtcagtcaaacagcggctgaag
ggcaaggaaggtcgtatccgtggtaacctgatggggaaacgtgtggatttctccgcccgc
gctgtcatcacgccggaccctaacctacagatcgaccaggtcggctgtccgcggactgtc
gcacaaaacctgaccttcccagagattgtcacacccttcaacattgacagaatgcaagag
ctagtgagaagaggagcgaaccagtatcctggtgcaaagtacattatccgagatacggga
cacagaatagacctccgctaccaccctaaacccagcgacctccatctacagtgtggctac
aaggtggagcgacacattcgcgatgatgacatcgtgatctttaaccgtcagcccacgcta
cataaaatgtccatgatgggccacagagtcaagatcctaccctggtcaaccttccgtttg
aacctaagtgtaacaacaccgtacaacgctgactttgacggagacgagatgaacctgcac
gtgccccagtcggtggagacgcgggcggagatcatggagctggccatggtgccgcgtatg
atcatcacgccgcagtctaaccgccccgtcatggggatagtacaggacacactcaccgct
gtcaggaagttcacacggagagatgtcttcatcgacagggagagcatgatgaacctactg
atgtggttacccacgtgggatggtaagatgccccagccggccatcctcaaacccaagcct
ctgtggacaggcaagcagctcttctccctcatcatcccaggacacatcaactgtatccgc
atgcacagtacgcatccagacgaggaagacagcggtccatataagtggatatctcccggt
gataccaaggtcattgtggaaaatggagaactgatctctggcatcctgtgtaagaagtcg
ttgggaccgtctggtggctcgctggttcacatcgtagcgttggagctgggccacgagatc
gccaaactcttctacggatacatccagacggtggtcaacaactggcttctactggaaggc
cacaccatcggtatcggggactgcatcgccgacacgcagacgtaccaagacatccagaac
accatcaagaaggccaagctggacgtgatagaggtcatcgagaaggcccataacgacgag
ctggagccgacgcccggcaacaccctcagacagacattcgagaatcaggtgaatcgaatc
ctgaacgacgctcgtgacaagactggaggcagtgcccagaagagcttgtccgagtttaac
aacttcaagtccatggtggtggccggctccaaaggctccaagattaacatctcacaggtt
atcgcctgtgtgggacaacagaacgtagagggaaagcgtattcccttcggcttccgccat
cgcacgctgccgcacttcatcaaggacgactacggtcccgagtctcgtgggttcgtggag
aactcgtacctggccggcctgacgccgtcggagtttttcttccacgccatgggcggtcgt
gagggactgattgacacagctgtgaagacatcagaaacaggttacattcagcggcgtctg
atcaaggctatggagagcgtgatgatcgcgtacgatgggacggtccgaaattctaaccgt
catctggtacagttgcgttacggagaggacggcctcgatgctgtttccattgagtttcag
aacctggcgactctcaagccttccaacagatcctttgagaagaagttcaaactggactac
caaaatgaaaggtacctgcggagaatcctgcaggaggacatcgtgcgtgagatcaccagc
gacgcgcgcctgcagacggagattgaggcggagttcgagcagctgcgagtggacagggac
gtgctgcgatctgtcaatcaaacaggcgacgccaaggtggcactgccttgtaacttggcc
aggattatttggaatgcccagaagatctttcatgttaacacccgggcacccactgacctt
cacccaatcaaggtcgttgaaggcgttcgagagctgagtaagaagctggtgattgtgaag
ggcgatgaccccatcagcatccaggcgcaggctaacgccaccatcctgttcaacaccctc
ctccgctccacactctgtacgcggcgcgtactggaagagttccgcctctccaccgaggcg
tttgattggctgttaggagaaatcgagtccaggttcaaccaggctattgtccagccaggt
gagatggtaggagcgctggctgcccagtccctgggagagcccgccacacagatgacacta
aacacgttccattacgccggcgtgtcggccaagaacgtcacgctgggtgtgccacgtctc
aaggagatcatcaatgtctccaagaagcccaagactccgtcactgacggtgttcctgctg
ggacaaccagctaatgatgcggagaaggcaaaggatatcctctgtagattggagcacacg
acccttagaaaggtcacggcgaataccgccatctactacgaccctgaccctcagaacacg
gtgatcgaggaggatcaggagtttgttaacgtgtactacgagatgccggacttcgaccct
caccgcatctcgccctggctgctgcgtatcgagctggaccgcaaacgcatgacggacaag
aagctgaccatggagtccatcgcagagaagatcaatgcaggcttcggagatgacttgaat
tgtatcttcaacgatgacaacgctgagaagctggtgcttcgaatccgtatcatgaacaac
gacgacagcaaaatgatggacgaggaggagatggtggataagatggatgacgatgtgttt
ctgcgctgtatcgaggccaacatgctgacagacatgacactacagggcatcgaacagatc
gctaaggtgtacatgcatttgccgcagcaggactccaagaagagaatcatcatcacagac
gagggagagtacaaggccctacaggagtggatcctggagacagacggagtcaacctcatg
aaggttctctccgagaagaacgtcgaccctgtccgaaccacgtctaacgacatcgtagag
atattccagatccttggcatcgaagctgtgcggaaggcgattgagaaggagatgaaccac
gttatctccttcgacggttcctacgtgaactaccgccacctggcactgctgtgtgacatc
atgacccagaagggtcatctcatggccatcacgcgccacgggatcaaccgccaggaggtc
ggacctctcatgaagtgctccttcgaggaaacggttgacatcctgatggagtcagcgtcc
cacagtgagacagactacatgtggggggtgtcagagaacatcatgctgggacagctggca
cggatcgggacgggctccttcgacttgatgctggacgcagagaagtgcaaatacggcatg
gagatccccactaacctggtgggaggggggctgatggctgggccaggaccagggatgttc
tttgggaacgcgggatctcccacggcgtccatgtcaccgcagatgacaccgtggcaacaa
gtgggcacgcccgcttatggtggggcgtggtcaccaggactcggaagtggcatgactcct
ggagctgcaggattctcgccctctgctgcgtcagatgccagtgggatgagtccagcaggc
tacagcccagcctggtcccccacccccggctccccagggtccccgggccctgccagtccc
tacatcccctccccggggggacccatgtctcccagctactcgccggcctcccctgcgtac
atgccgcgcagccccggcgggatgacgccacagagtcccggctactcgccgacttcgccg
tcgtattcaccgacatcaccgagctactcgccggcaagtcccaactacagcccaacgtcg
ccgagctattcaccgacgtcgccgagctacagtccgaccagtccgagttactccccgacc
tcgccgagctactcaccaaccagcccaagttactcgccaacatcaccgagctactcacca
acgagtccgagttactcaccgacctcgccatcgtacagcccaacctctccttcctacagc
ccaacgtcaccctcctacagcccaacttcaccttcctattcccccacctctccgtcttac
agtcctaccagcccgtcttacagccccaccagtccatcctacagccccaccagcccctct
tactcacccacgtctcccaactacacacccacgtcacccaagtactcacccacctccccc
agctactcacccaccagtccttcgtactccccagcctcacccagctacagtcccaccagt
cccagctactcacccagctcacccaactactctccccagtcccccagctactcacccagc
tcacccagctattccccatccagtcccaagtactctccaacctcacccagctacagccca
acctcaccccagtacacccccacctcacccaagtacagtcccacgtctcccaagtacagt
ccctcctcacccaagtacactccaacatcccccaagtacagcccttcctcacccaagtac
agcccctcgtctcccaagtactcacccacctcccccacctactccccatccagtgccaag
tactcccctgcctcgcctagctactccccctccactccaaaatacacacccacgtctccc
aagtacagccccgccagccccacctacacacccacgtccccgaaatacagtcccacctca
cccagctacactccagacactccaaagtacagccccacatctcctaagtacagccccacg
tctccgacctactcacccaccagtcccaagggttccacctactccccgaccaccccgggt
tattccccggcctcccccacgtacagccccgagagcccagaaagccaggccacgcatgaa
gaggaggaggacgaatcttaa
DBGET
integrated database retrieval system
