KEGG T07532: 109464284

Branchiostoma belcheri (Belcher's lancelet): 109464284

Entry

109464284         CDS       T07532

Name

(RefSeq) cleavage and polyadenylation specificity factor subunit 4-like

K14404

cleavage and polyadenylation specificity factor subunit 4

Organism

bbel Branchiostoma belcheri (Belcher's lancelet)

Pathway

bbel03015

mRNA surveillance pathway

Brite

KEGG Orthology (KO) [BR:bbel00001]
09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    109464284
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bbel03021]
    109464284
   03019 Messenger RNA biogenesis [BR:bbel03019]
    109464284
Transcription machinery [BR:bbel03021]
Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     109464284
Messenger RNA biogenesis [BR:bbel03019]
Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     109464284

SSDB

Motif

Pfam:

zf-CCCH zf_CCCH_4 Torus zf-CCHC zf-CCCH_3 zf-CCCH_2 zf-CCCH_4 zf-CCHC_3 zf-CCHC_2 Nab2-like_zf-CCCH_

Other DBs

NCBI-GeneID:

109464284

NCBI-ProteinID:

XP_019616799

UniProt:

A0A6P4Y2Y7

LinkDB

Position

Unknown

AA seq 300 aa
MEEVVASVGGIRFEMEIAIEEQRGSQPLPFPGMDKSGAAICDFFVRGSCVKGASCPFRHV
RGEKSVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGACSNKECPFLHIDPESK
IKDCAWYDRGFCKHGPHCKNRHVRRTMCMNYMVGFCPEGPKCKYKHPKFDLPISDTATKK
TSIVCHHCGESGHKAISCPSNPNAQPEAQNFTSPSHGPGYTFRPREERGPAGQYRPLESV
TCFKCGEKGHYANKCPKGHLAFLSTSLHPGQQHGSPGHPPPRPLGPPPTRPLGPPPQVPS

NT seq 903 nt +upstreamnt +downstreamnt
atggaggaagtcgtggcgagtgtcggagggatcaggtttgagatggagatcgcgattgag
gagcagagaggctcacagccgcttcctttccccggaatggacaaatccggagctgcgatc
tgtgacttctttgtgcgtgggagctgtgtgaagggtgcgagctgtcccttcagacacgtg
cgcggggagaagagcgtggtctgtaaacactggctgagggggctgtgtaagaagggagac
cagtgcgagtttctacacgagtacgacatgaccaagatgcctgagtgttacttctattca
aaatttggagcttgtagtaataaggaatgtccattcctgcacattgatcctgagtccaag
ataaaagactgtgcctggtatgacaggggcttctgcaaacatgggccacactgtaagaac
agacacgtcagaagaaccatgtgtatgaactacatggtaggcttctgtccagaagggccc
aaatgcaagtacaagcatcccaagtttgatcttccaatttctgacactgcgacaaagaag
acgtctatagtttgccatcactgtggggagagcggccacaaagccatcagttgtcccagt
aaccccaatgcacagcccgaagcacagaactttacatcaccttctcacgggcctggctac
acgttccgaccgcgagaggagcgcgggcccgccggacagtacagaccgctggagtctgtc
acgtgtttcaagtgtggagagaagggccactatgccaacaagtgtcccaagggtcacctg
gcattccttagtacatcgctacaccccggtcagcagcacggctcacccggtcatcctcca
ccaagaccactcggacctccccctacaagaccactcgggccccctccacaagtcccctcc
tga

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