Branchiostoma belcheri (Belcher's lancelet): 109464461
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Entry
109464461 CDS
T07532
Name
(RefSeq) collagen alpha-2(IV) chain-like isoform X1
KO
K06237
collagen type IV alpha
Organism
bbel
Branchiostoma belcheri (Belcher's lancelet)
Pathway
bbel04512
ECM-receptor interaction
bbel04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bbel00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109464461
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109464461
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bbel04147
]
109464461
00536 Glycosaminoglycan binding proteins [BR:
bbel00536
]
109464461
Exosome [BR:
bbel04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
109464461
Glycosaminoglycan binding proteins [BR:
bbel00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109464461
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
109464461
NCBI-ProteinID:
XP_019617007
UniProt:
A0A6P4YE18
LinkDB
All DBs
Position
Unknown
AA seq
1792 aa
AA seq
DB search
MKFRGVLERHVLTSLAAVLILACCIQLSAAAACEGCTGKCVCNGTKGIKGERGLPGLQGP
PGLPGFQGLEGPPGPKGLVGGRGNQGSMGPKGIRGAQGIPGFAGVPGIPGLPGLEGPMGP
PGLDGCNGTKGDFGPRGTPGPAGRSGDPGLPGLDGPKGEPGESGGAGEGIKGDRGDVGRN
GLPGPPGLNGLPGPQGDSGVQGQKGFPGPRGFQGEKGDMGLGFQGPKGAKGESGLPGPPG
PPGILGEQVGLPGQIFPSQGQKGEPGAAGPIGFQGQKGEPGLPGPPGATISGPAPLPGAV
GGMGQKGEPGIPGPPGLPGQTGPPGPFGFNGQKGDPGAPGGSGGPGFVGQKGEPGVPGRA
GAPGAPGTASVGGRPVPGPQGAPGNPGGAGFPGQKGEPGLPGFGGPKGYPGPAGTPGPPG
RPATGGASFPGPPGNPGAPGRDGPMGPPGGPGFPGAKGEPGAPGATMGGGVGPPGRPGGP
GFPGAKGERGNPGAPGLPGAPGQAIGGVGPQGPMGPPGEPGRPGGPGLPGGAGTPGFPGP
KGEPCGGCPPGFPGPKGDRGFPGPPGPTVGGGQPGTPGFPGAKGEPGFPGGRGLDGPPGP
AGRPGAPGFPGVKGEPGFVPAVAGTPGFPGPKGDPGIPGSPGQPGRDAIGGLVGPPGTPG
FPGAKGEPGNPGFDGGPGAPGNPGGPGPMGPPGIALGGGVGAPGAKGDPGFPGSPGTPGF
PGAKGEPAFGASTVGPPGPIGLPGPPGPPGLNGPPGLPGGPGGPGSPGGNGFPGQKGEPG
LPGGTGPGGQGLPGAKGEAGVPGFPGPKGEPGFPGGPGQPGGPGFPGQKGEPGFSGGGGL
PGPPGPPGGNGFPGPKGDAGFPGGPGGLGPAGNPGPPGPPGMPGNPGLDGFPGPKGEPGR
GSGGFPGPQGPPGPPGPPGGGGFPGQKGEPGLPGFGGVGAKGDPGRDGAPGDSGLPGPPG
LPGPRGLDGGPGFPGPKGEMGVMGLPGGPGPMGPPGSPGFGGPKGEPGIPGGPGLPGGPG
FPGQKGEAGFPGGPGPMGPPGPMPPAGLMGPKGDPGFPGQDGQPGTVGFPGPPGPKGNPG
LGGPPGTPGFPGAKGESGIPGSPGSPGFPGAKGEPGIPGRPGGPGFKGDPGFPGGPGNPG
SPGMPGQKGEPGFGGSIPGPPGLPGRKGEPGRPGGNGYPGAKGEPGFPGGPGQPGRDATS
AARGAPGLPGTPGIPGAKGERGNPGPPSGPGRPGPQGPPGFPGPKGEPGIPGGPGRDGGP
GGPGFPGQKGEAARGGAGLPGAAGRPGGKGEAGLPGPPGRPGFPGAKGEAGLPGGPGFSG
PPGPPGPPGRGGFGQKGEAGVPGGPGRDGGPGPMGPSGGPGRPGFSGQKGEPGPMGPPGR
SVGGGLPGPPGPMGTPGSPGFPGAKGERGSPGIGGFQGPKGDRGGPGLPGGPGQPGNPGF
SGLPGPKGDPGLPGPPAVGLKGEPGFPGGPGQPGSSGSDGLPGPPGPPGYPGPKGNPGLP
GRSGFPGTKGNPGAPGLQGPPGTSGPPGPPGFPGQPGAPGASGGNQGYIFARHSQTTQVP
TCPRYTTKMMDGYSLLYTQGNERTHGQDLGTAGSCLRRFSVMPFLFCNINNQCQVASRND
YSYWLSTPEPMTMSMAPIRGRAIEPYISRCVVCEAPAQVLAVHSQALTIPPCPNGWSSLW
MGYSFVMHTGAGAEGTGQALASPGSCLEDFRSSPFIECHGRGTCNYYATTYSFWLTTIEQ
GSEFRTPNPETLKAGNLRQRISRCQVCMRYQPPRGDTGRPFGSEAESITGGK
NT seq
5379 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttcgaggcgtgttagaaagacacgtcttgacgtcgttagcggcggttctgata
ctggcctgctgcatccagctatcagcggctgcggcatgtgaaggctgtactggaaaatgt
gtttgcaatggaacgaaaggaatcaagggtgaaagaggactaccaggtctacaaggacct
cccggcttaccaggcttccaaggactagagggaccacccggaccaaaaggactagtggga
ggaagaggaaatcagggctctatgggaccaaagggcatcaggggtgcacaaggtattcca
ggctttgctggtgtcccaggaattccaggtctgccaggattggaaggacccatgggtccc
cctggactggatggctgcaatggaacaaaaggagattttggacccagaggcacaccaggc
cctgcaggaagatctggtgatccgggtttgcctggacttgacggaccaaagggtgagcca
ggtgaatctggtggtgctggagaagggatcaagggagacagaggcgatgtcggcagaaac
ggactacctggcccacctggacttaacggacttcctggaccacaaggagattctggagtt
caaggccaaaagggtttccctggacctagaggcttccaaggagagaagggtgacatgggc
ttgggcttccaaggaccaaagggagcgaagggagagagtggtctacccggcccacctgga
ccccctggcattctaggagagcaagtcggactccccggacaaatcttcccctcacaagga
caaaagggtgaaccaggagcagcaggacccattggtttccaaggccagaagggagagcca
ggcctgcccggaccccctggtgccacaatatcaggaccagcgcccctacctggagctgtc
ggcggtatgggccagaagggagaaccaggcatccccggaccacctggtctgcctggccaa
actggaccccctggaccttttggcttcaacggacaaaaaggtgaccctggtgcgcctggt
ggatctggcggccctggttttgttggacagaagggagaacctggcgtgcctggacgggct
ggagcacctggagcacctggtacggcttcagttggtggcaggcctgttcctggacctcag
ggtgcgccaggcaaccctggtggtgctggattccctggacagaagggagagcctggtctc
cccggcttcggcggccccaagggttaccccggacccgctggtactcctggcccgcctggc
cgccctgcaactggtggtgcatccttccctggcccccctggaaacccaggtgcccctgga
cgtgacggacccatgggtccccctggtggccccggattccccggcgctaagggagaacct
ggtgcgcccggagcgactatgggtggcggtgtaggtccacctggacgccctggcggtcct
ggattccccggcgctaagggagagagaggaaaccctggtgcacccggtctgcctggtgcc
cctggtcaggctattggaggagttggaccacagggccccatgggtccccctggtgaaccc
ggccgccccggcggtcctggtctccccggaggagctggaacacctggattccctggtcca
aagggagaaccatgcggcggctgcccacctggcttccccggacccaaaggagaccgtggc
ttccctggcccacccggcccgactgtaggaggaggacagcctggcactcctggcttccct
ggtgccaagggtgaacccggattccctggaggaagaggattggatggaccaccgggccct
gctggtcgtcctggcgcccctggcttccctggtgtgaagggtgaacctggcttcgttcct
gccgtagcgggaactcctggtttccccggacccaagggtgaccctggtattcctggctcc
cctggtcagcctggccgtgatgctattggtggactggttggaccacctggaactcctggc
ttccctggagctaagggtgaacctggtaaccctggttttgacggaggacccggcgcccct
ggtaaccctggtggacccggcccaatgggaccacccggtatagcgctaggcggtggggtt
ggtgccccaggtgccaaaggtgaccccggtttccctggatcccctggtactcctggcttc
ccaggcgctaagggagagcctgccttcggtgcatctacggtaggcccacctggtcctatt
ggtctgcctggcccacccggtccccctggtctgaacggcccccctggacttcctggtggc
cctggtggtcccggctcccccggtggtaatggcttccctggacagaagggtgagcctggt
cttcccggaggtactggtcctggtgggcagggtctgcctggtgctaagggagaggctgga
gtacctggattccccggcccgaaaggagagcctggttttcccggcggccctggccagcca
ggcggccctggtttccctggacagaagggtgagcctggcttcagcggcggcggtggactt
cccggaccccctggtccccctggaggcaacggattccctggacctaagggagatgccggt
ttccctggtggacctggcggactcggaccggccggaaaccctggaccacccggacctcct
ggcatgcctggtaaccctggtttggacggcttccctggccctaagggtgagcctggacgt
ggctctggaggcttccctggacctcaaggaccccctggacctcccggaccccctggtggc
ggtggattccctggacagaagggagagcctggtcttcccggattcggcggcgtcggagcg
aagggtgaccctggccgcgatggagctcccggtgactctggcctgcccggtccacctgga
ctgcctggaccacgtggtctggacggaggccctggtttccctggaccaaagggagagatg
ggtgtaatgggtctgcctggtggacctggacctatgggaccccctggatcccccggattt
ggtggacctaagggtgaacctggtatccctggcggacctggtctgcctggaggccctggt
ttccctggacagaagggagaggctggattccctggtggccctggacctatgggaccccct
ggaccgatgccacctgctggactgatgggacctaagggagaccctggattcccaggtcag
gatggtcagcctggtactgttggcttccccggcccgcccggtcccaagggtaaccctggt
ctgggtggtccccctggtaccccaggcttccctggcgctaaaggagagagtggaatcccc
ggctcacctggatcacctggcttccccggagcgaagggtgaacctggtatccccggacga
ccaggcggacccggcttcaagggtgacccaggtttccctggaggccctggaaaccctggt
tccccgggcatgcctggacagaagggtgaacctggctttggtggttccatccctggaccc
cctggtcttcctggacgcaagggtgagcctggcaggccaggtggcaacggctaccctgga
gctaagggtgagcctggcttccctggaggacctgggcagcccggcagagatgccacctct
gctgctcgcggagctcctggactaccaggtacccctggaatccccggtgccaagggagag
agaggtaaccccggcccgcccagcggccctggacgtcccggaccccagggtcctcccggt
ttccccggccctaaaggtgaacctggcattcctggaggccctggtcgcgacggtggtcct
ggaggccccggtttccctggtcagaagggtgaggctgcaagaggtggtgctggcctgcct
ggtgctgctggacgacctggtggtaagggagaggctggtcttcccggtccccctggacga
cctggattccccggtgcaaagggagaggctggtcttcccggaggccctgggttcagcggc
cctcctggtccacctggcccacccggacgtggaggatttggacagaagggagaggctggt
gtgcctggcggtcctggtcgtgatggtggtcctggtcccatgggtccctctggcggccct
ggtcgccctggattctccggacagaagggagaacctggtccgatgggaccgcctggtagg
agtgttggtggaggactccctggcccacctggccccatgggtacccctggatcccccggc
ttccccggagcgaagggagagcgtggatcacctggcattggcggattccaaggaccaaag
ggagaccgcggcggccctggtctgcccggaggccctggccaacccggaaaccctggcttc
tctggtctacctggtcctaagggtgatcccggcctgcccggtcccccagctgttggtttg
aagggagagcctgggttcccaggaggcccaggccagccaggttcctcaggctccgacggc
ctgcctggcccacctggtcctccaggttacccaggtcccaaaggaaacccaggtcttcct
ggaagatctgggttccctggaaccaaaggaaaccctggtgctcctggtctgcaaggtcct
cctggtactagtggtccccctggtcctcctggcttccccggacagcccggagccccagga
gccagcggcggcaaccaaggctacatctttgccagacacagccagaccactcaggtaccc
acgtgcccgcgctacaccaccaagatgatggatggctacagtttgctgtacacacagggc
aacgagagaacacacggacaggatctaggcacggctggcagctgtttgagaaggttcagc
gtcatgccattcctcttctgcaacatcaacaaccagtgccaggtggcctccagaaacgac
tactcctactggctgtccacccccgagcccatgaccatgagcatggcgcccatccgcggc
cgtgccatcgagccttacatcagtagatgcgtggtgtgcgaggcccccgcccaggtcctg
gccgtccacagtcaggcgctgaccatcccaccctgtccgaacggctggagcagcctgtgg
atgggctacagcttcgtcatgcacactggtgcaggtgctgagggcactggacaagcgctg
gcgtcgccagggtcttgtctggaggacttccgctcatcgccattcatcgagtgtcatggc
aggggcacgtgcaattactacgccaccacgtacagcttctggttaacaaccattgaacag
ggctctgaattccgaacgcccaacccagaaactctaaaggcaggtaacctacggcagcgc
atcagtaggtgtcaggtctgcatgcgttaccaacctccacgaggggacaccgggcggcca
ttcggctcagaagcagaaagcatcacaggagggaagtaa
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