Branchiostoma belcheri (Belcher's lancelet): 109466141
Help
Entry
109466141 CDS
T07532
Name
(RefSeq) protein SMG7-like isoform X1
KO
K14409
protein SMG7
Organism
bbel
Branchiostoma belcheri (Belcher's lancelet)
Pathway
bbel03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bbel00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109466141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbel03019
]
109466141
Messenger RNA biogenesis [BR:
bbel03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
109466141
mRNA cycle factors
Common to processing body (P body) and stress granule
109466141
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
109466141
NCBI-ProteinID:
XP_019619347
UniProt:
A0A6P4YKW3
LinkDB
All DBs
Position
Unknown
AA seq
1083 aa
AA seq
DB search
MVLSKSKWQRPGEVKQGEMNVAEILRKAEVLKADVADGRMGPAEAWTSRQTLQDLYQQAL
VTDLEYALDKKVEQDLWNHAFKNQITAMQMQTKDKTNPSRRDIQASLAVFLEGASGFYLQ
LLQELCSAFDLDLPFRPKSSNYGIMGEPSPWHKILPPQPSSCLYICQHCLVHLGDIARYR
NQLSQAESFYRHAAQLVPYNGQPYNQMAILAASRAEQLPMVFYYCRSIAVKHPFPAAATN
LNKTFSKLADGENELKTHKLSSHEVVLYFLRFHAHIYLSKDLPFAAKIKDLLISQFRTHL
YQEAFTLRELVYMVAINLFSLHHVRDCTTDKDIDTAAYSDDEMVGWNLALGMSMSLLSLM
LHYIPTKSDQSAQDSPCLAAVKVTLDWLTHRPNLFEEETIMDKPFIWPKLARVLNCIQLK
ERINNPANRPLPEDFELQGFLPLVKAHRPLDFSKGQSSILEPGEVQVQYRCQRLCDIGTW
ITDNKPSLLKKQGKPGVQTVKFTSPLKEEARDDKGRGKSEEGEGEELAPSWSGEGEGGMK
EVLSEEGLKSVGIQAVISRDNRSPEVNQGEGQQQVRQHQPAIAPQTVPLHHPFQVQHQEH
LHQQQLQLLQQQQRLQQLQQQQQGLPSPPVAAVPPRSTQDSTQYPLLPTGSVSLEMLALP
PFIGLQQQLIKSSGTFPGVPGQLPELPHQFSLPINTSGMEQSDLRGPNADSLPMPGFSGT
SKLNQGQAPKGSGHQYVSPFSGPAGTTSGLQGLLSEGLETYSPAVSTSWPEPGRPRGLPA
EGLSRAVGSPVPASGGQTHHNPLYKEDRADEGFPGVGVPAFNTAPGANLKPQQQQGREPR
RSPVDTFPSSRIAMAFPALSKGKSSVPSSAPSFDDYSRPEASPDQAVFTDYSPSLLPPQS
TGSGSYSLFQSSWSTPITSSTGQSLTDRGPYSSSQLLSDSFSSASETSFSQAFRDTLHLE
GNLGSQYLPQEAEGFPDRYEPDSSHSQDRGGFSGQGRGEFHGSAFPGTESSHLSQLGTNI
GLGFSSSGSSWPPPSTSTTDTGNTGYFSSDLQSIWSSTPASSGQSALEQLLQQQKQQRDN
TPP
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atggtattgtccaagtcaaaatggcagcgacctggcgaggtgaaacagggtgagatgaat
gttgcagaaattctcagaaaagctgaggtgctgaaagctgatgtggcagatgggcggatg
ggtccagcggaagcctggacgtccaggcagaccctacaggacctgtaccagcaggccctg
gtcactgacctggagtacgctctggacaagaaggtggaacaggacctgtggaaccatgca
ttcaagaaccagataactgccatgcagatgcagaccaaggataaaactaaccccagtaga
cgagacatccaggccagtctagctgtgttcctggagggagccagcgggttctatctgcag
ctgctgcaggagctctgctctgcgtttgacctggacttacccttcaggccaaagtcttcc
aactatggcatcatgggagagccaagtccctggcacaagatcctgcccccccagcccagc
tcctgcctgtacatctgtcagcactgcctggtgcatctgggagacatcgctcgctacagg
aaccagctgagtcaggcagagtccttctacagacatgccgctcaacttgtaccttataat
ggtcagccctacaaccagatggctatcctggctgcgtcgcgtgcggagcagctgccgatg
gtcttctactactgccgcagcattgcagtcaagcatccttttcctgctgcagccactaac
ctcaacaagaccttctccaaactggccgatggagaaaatgagttgaagacccacaagttg
tcgtcccatgaggttgtcctgtatttcctgaggttccatgcacacatctacctgagcaaa
gatctgccctttgctgctaaaatcaaagacttgctgatcagtcagttcaggacccacttg
tatcaagaggcgttcacgttacgggagcttgtgtacatggtggcgatcaacctgttctct
ctgcaccacgtgcgagactgcaccaccgacaaggacatcgacacggctgcgtacagcgat
gacgagatggtgggctggaacctggcgctgggcatgtcaatgtccttactgagcctgatg
ttacactacatccccaccaagtctgaccagtcagctcaggactccccatgtctggctgca
gtcaaagtcaccctggactggctcactcacagacccaacctctttgaggaagaaacaata
atggataaacccttcatatggccaaagcttgcaagagttttgaactgtatccagttgaaa
gaaaggatcaacaatccagcaaatcgccccttacctgaggactttgaactgcaaggattc
ttgccattggttaaagcacacaggcctttggactttagcaaagggcagagttccattctg
gagccaggtgaggtgcaggtgcagtacaggtgccagcggctgtgtgacattggcacctgg
atcactgacaacaagcccagtttgctgaagaaacaaggaaaaccaggtgtacagactgtc
aagtttacaagtcccttaaaagaggaggccagagacgacaagggaagaggcaagtctgag
gaaggagaaggagaggagttggctccatcctggtcaggagagggggaggggggcatgaag
gaggtcctgtctgaggaagggctgaagtctgtggggatccaggctgtcatcagcagggac
aacaggtcgcctgaggtcaaccagggagagggacaacagcaggtccgccaacaccagcca
gcgattgccccccagactgtacccctgcatcatccattccaagtacaacatcaggaacat
ctccaccagcaacagctgcagctcttacagcaacagcagagactgcagcagctacagcag
caacagcaaggtctgcccagcccccctgttgcggctgttcctccaaggtcgacccaggac
agcactcagtaccccttgctgcccactgggagcgtttcactggaaatgctggcattgccc
cccttcatcgggcttcaacaacagttgatcaaatcatcaggcacctttcctggtgtgcca
ggacagcttcccgaactcccgcaccagttcagtctaccaatcaacacgtcaggaatggaa
cagtctgatctgaggggccccaatgcagacagcctgccgatgcctggtttttcaggcacc
agcaagttaaaccaaggacaggcccctaagggcagcggccatcagtatgtttctcccttc
tcaggcccagcaggcactacttctggcttgcaaggcctgctgtcagaagggctggagacc
tactccccggccgtgtccacgtcctggcctgaaccaggcagacccaggggccttcccgcc
gaggggctgtccagagcggtgggttccccggtgcctgcctcgggtggacagacacatcac
aatccgctgtacaaggaggaccgtgcagatgaaggcttccccggggtgggggtgccggcg
ttcaacaccgcccctggggccaacctgaagccccagcagcagcagggccgcgagccgaga
cggtcaccagtagacaccttcccttcgtccaggattgccatggcattcccagcactgtct
aaggggaagtcatctgttccatctagtgcaccatcctttgatgactattctcggcccgag
gcctcccctgatcaggctgtgttcacagactacagccccagcctgctccctccccagtct
acaggcagtgggtcgtactccctcttccagtcctcctggtcaacccccatcaccagcagt
actggacagtccctcactgacagaggcccgtactcctctagtcagctgttgtctgactcc
ttctcctcagcgagtgagacgagtttctcccaggccttcagggacaccttacacctggag
gggaacctgggcagccagtacctgcctcaggaggccgaggggttccccgaccggtatgaa
ccggattccagtcattcgcaggacaggggcggcttcagcggtcaggggagaggggagttc
catgggtcagcattcccaggaacagagagtagtcacttgagtcagctggggaccaacatc
gggctggggttcagcagttctggcagctcctggccacctccctccacatctaccacagac
actggcaatactggctacttctccagtgatctacagtctatctggtccagcacgcctgcc
agctcaggtcagtcagccctggaacaactcctgcagcagcagaaacaacagcgagacaac
accccaccctga
DBGET
integrated database retrieval system
