Branchiostoma belcheri (Belcher's lancelet): 109466480
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Entry
109466480 CDS
T07532
Name
(RefSeq) THO complex subunit 5 homolog isoform X1
KO
K13174
THO complex subunit 5
Organism
bbel
Branchiostoma belcheri (Belcher's lancelet)
Pathway
bbel03013
Nucleocytoplasmic transport
bbel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109466480
09122 Translation
03013 Nucleocytoplasmic transport
109466480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbel03019
]
109466480
03041 Spliceosome [BR:
bbel03041
]
109466480
Messenger RNA biogenesis [BR:
bbel03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
109466480
Spliceosome [BR:
bbel03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
109466480
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
109466480
NCBI-ProteinID:
XP_019619763
UniProt:
A0A6P4Y5N4
LinkDB
All DBs
Position
Unknown
AA seq
692 aa
AA seq
DB search
MASSAGKKRPMVRVSRTDSSSNLTDKDSKKPKMDSGDRQGESASLYSEEEEAAQRDPAKD
VSLYKTACDGIRQLLQEIQDIRGSGRKDAAAEIAERKIQASMHFITLKKLNRLAHMRCKK
ARDTTHEHKQKVDSYHLQLQNLLYEVLHLQKEITKCLEFKSKDEEIELVDEAEFYKEAPE
DISKPDVTQQDPHQLTLARLDWELEQRKRLAAKCKDYEDQKEEISQEIQTRRDQLDSLLP
RLNTVLESTKPLQEALKMPFDEMRQQHRMAQFLPRPLYVLYVQSSAYQQACDPALTVTIE
GDLDAAKSSGPSTSAALDVDSDSDDEEGTKEKSRRRRTISVDPTDRRGKVLHKHPLQVNI
TIKCKDGSSLALTFHYLLALQVVTVIVQLQPAAEAVTVSISGGDLLSPSSLLSCLFPGDH
GNTTPNPANQFLLERASIEDFNECVKEVGKPYVWAQQLAGLQFLNTEEPPKPDTHLSSTH
MEKTMKALKVRVRARLALVQQLASLERGSVPVNRECQHLFPTKITSRLTTWKSITYDDYI
VLPYSQPVVDSGMVHETDNFYLAVVQRGSATLTAAVLLSPGYLTCPPVFSLNLNMGTDRT
ASSDENIRAMEHEVNVHYKELLVKGSHDQLLTNQLQRLLMCLDVYLETQSTSSATEGPSE
FGREKICPRIVRGPSRCKPFVFNSQHGFFTQR
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctccgctggaaagaagcggccgatggtccgcgtgtctcggacggattcatcc
tccaatctgacagacaaggactctaaaaagccgaagatggactctggagatcgccagggt
gagtctgcctccctgtacagtgaggaggaggaggcagcccagcgagacccggccaaggat
gtcagcctgtacaagacagcctgcgacgggatcagacaactcctgcaggagatacaagac
atcaggggcagcggaaggaaggatgctgctgctgagatagccgagagaaaaatccaggcc
agcatgcacttcatcactctcaagaaactcaacagattggctcacatgcggtgtaagaag
gcccgggacacgacccacgagcacaagcagaaggtggacagctaccacctgcagctgcag
aacctgctgtacgaggtgctgcacctgcagaaggagatcaccaagtgtctggagttcaaa
tccaaggatgaagaaatagagcttgttgatgaagcagagttctacaaagaggccccagag
gatatctctaaacctgatgttacccagcaggacccccaccagctgaccctggcgcggctg
gactgggagctggagcagaggaagcggctggcggctaagtgtaaggactacgaggatcag
aaggaggagatctcacaggagatccagacccgccgagaccagctggacagtctgctgccc
agactcaacactgtgctggagtctaccaagcccctccaggaggcgctaaagatgccattt
gacgagatgcgacagcagcacaggatggcccagttcctgcccaggcctctctacgtgctg
tatgtccagtcttcagcctaccaacaagcctgcgatcctgccctgacagtgaccattgag
ggagacctggatgcggccaagtcctccggaccgtccacctcagctgccctggacgtggac
agcgactcggacgatgaggaggggaccaaagagaagtcccgccgtcggcgtaccatcagt
gtagaccccacagacaggagggggaaagttctgcacaaacatccactacaagtcaacatc
accatcaaatgtaaagatgggtccagcctggccctgacgttccactacctgctggctctg
caggtggtgacggtcatcgtccagctccagccggcagccgaggctgtcacagtctccatc
tcaggaggggatttgctgtctccgtcctccctgctcagctgtctgttccctggtgaccat
ggcaacaccacgcccaaccctgccaaccagtttctactggagagggcaagtattgaagac
ttcaacgagtgtgtgaaggaggtgggcaagccttacgtgtgggcccagcagctagcaggg
ctacagttcctcaatactgaagagcccccgaagcctgacacacatctcagttcgactcac
atggagaagaccatgaaggctctgaaggttcgagtacgggccaggctggctctggtgcag
caactagcttcactagagagaggctcagtcccagtaaacagggaatgtcagcatctcttc
ccaaccaagatcacatcaaggctgacaacatggaagtccatcacctatgatgactacatc
gtcctcccttacagccagcctgttgtagattcaggaatggtccatgaaactgacaacttc
taccttgcagtggtgcagcgtggttcagccactttgacagcagctgtcttgttgagcccc
ggctacctgacctgtcctcctgtcttcagcctcaatctcaacatgggcacagaccggaca
gccagcagtgatgaaaacatcagggccatggagcatgaggtcaacgtccattacaaagaa
ctactggtgaaggggtcacatgaccaactgctgaccaatcagctgcaacgattgctgatg
tgcttggatgtgtacctggagactcagagtaccagcagtgcgacagagggaccttcggag
ttcgggcgagaaaagatttgtccacgaatagttaggggtcccagtcgatgtaaaccgttt
gtcttcaacagtcaacacgggttcttcactcagcgttaa
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