Branchiostoma belcheri (Belcher's lancelet): 109467068
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Entry
109467068 CDS
T07532
Name
(RefSeq) superkiller viralicidic activity 2-like 2 isoform X1
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
bbel
Branchiostoma belcheri (Belcher's lancelet)
Pathway
bbel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109467068
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbel03019
]
109467068
03041 Spliceosome [BR:
bbel03041
]
109467068
03009 Ribosome biogenesis [BR:
bbel03009
]
109467068
03016 Transfer RNA biogenesis [BR:
bbel03016
]
109467068
Enzymes [BR:
bbel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109467068
Messenger RNA biogenesis [BR:
bbel03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
109467068
Spliceosome [BR:
bbel03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
109467068
Complex C
U4/U6.U5 tri-SnRNP related factors
109467068
Ribosome biogenesis [BR:
bbel03009
]
Eukaryotic type
Pre-60S particles
Helicases
109467068
Transfer RNA biogenesis [BR:
bbel03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
109467068
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MTR4_beta-barrel
DSHCT
DEAD
MTR4-like_stalk
DEXQc_Suv3
Helicase_C
nSTAND3
DBC1
AAA_22
Motif
Other DBs
NCBI-GeneID:
109467068
NCBI-ProteinID:
XP_019620531
UniProt:
A0A6P4YTC9
LinkDB
All DBs
Position
Unknown
AA seq
1035 aa
AA seq
DB search
MAAFGDADELFGVFEEKEASPPKPGPSKEEGKTQKKGKYPDKASKSKRSITQEEEEDAGS
KKPKTVSISVLSEPLNTEALSQAELDLLPKIRTETVDTEQACTHEVAYPEDCKYEPVKEL
STTPAKVYPFVLDPFQKEALRCLESNQSVLVSAHTSAGKTVVAEYAIAMSLRDKQRVIYT
TPIKALSNQKYRELYEEFQDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSELMREVAW
VVFDEIHYMRDKERGVVWEETIILLPDNVHYVFLSATIPNARQFAEWICWLHKQPCHVVY
TDYRPVPLQHYIFPAGGDGLHLVVDETGTFREDNFNTAMAVLRDGGDNSKGDRWSKRGFT
KGPSNAFKIVKMIMERNFAPVIAFSFSKKECEAYALQMSKLDFNTDEEKKLVEEVFFNAI
DCLSDEDKKLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFSMG
LNMPARTVLFTSARKFDGKDFRWVSSGEYIQMSGRAGRRGLDERGIVILMIDEKMGPSVG
KNLLKGAPDPLNSAFHLTYNMVLNLLRVEEINPEFMLEKSFYQYQNYSSIPGMITKLQKL
QEDYNAMTIPEEDSITAYYKLRQQLDKHGQEIEGFIHKPKYCLPFLQPGRLVKVRNAEDD
FGWGVVINFQKKANQKAPNNSSAEPLYVAEVLLLCSKESVRNASTESAKPCRAGEKGEMV
VVPIMLHLIRSISSVRLYIPKDLRPPDNRESVLKSIQEVQRRFPHGVPLLDPIEDLGIKD
DQLKTTVRKIEAFEHRMYSHPLHSDQRLPELYSLVEKKAQLAGELKAAKREVKKARTIIQ
MDELKCRKRVLRRLGYATTADVIEMKGRVACEISSADELLLTEMIFNGVFNDLDAHQCVA
LLSVFVFQEKASEMPRLTEELAGPLRQMQESARRIAKVSAEAKMSIEEEEYVESFRPHMM
DVCHAWSKGATFAQICKMTDIFEGSIIRCMRRLEELMREMCHAAKAIGNTELENKFADGI
TKIKRDIVFAASLYL
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atggcggctttcggtgatgcggacgagctttttggcgtgttcgaggaaaaggaggcttcc
ccgccgaaacctggaccttctaaggaggagggcaagacacagaagaaggggaaatatccg
gacaaagccagtaagagtaagaggagcataacccaggaggaagaggaggatgctgggagt
aagaaacccaagacggtttccatctctgtcctgtcggaacccttgaacacagaggctctc
tcacaggctgaacttgacctcctgcctaagatccgtacagagacagtggacacagaacag
gcctgtacacacgaggtggcctatcctgaggactgtaaatatgaacctgtcaaggaactc
tccactacaccagcaaaggtgtacccgtttgtcctggacccgttccagaaggaggctctg
cgatgtctggagagtaaccagtcagttctggtgtcagctcacacgtctgctggcaagact
gtcgtggcagagtatgccattgccatgtctttgcgagacaaacagagagtgatctacacc
acacccatcaaggccctgagtaaccagaagtaccgggagctgtatgaggagtttcaggat
gtcgggctgatgacaggagatgtcaccatcaaccccacagcctcctgtctcgtcatgaca
acagagatcctgcggagcatgttataccgagggtcagagctgatgagggaagtggcctgg
gtggtgtttgatgagattcactacatgagagacaaagagcgtggagtggtttgggaggag
accatcatcctgctaccagacaatgtgcactatgtgttcctgtctgccaccatccccaac
gccaggcagttcgctgagtggatctgctggcttcataaacagccgtgccatgttgtgtac
acagactacagacccgtgccgctgcagcactacatctttccagcagggggcgatggttta
cacctggtggtggacgaaacaggcacgtttcgagaagacaactttaacactgccatggcc
gtactgagagacgggggagacaactctaaaggagacaggtggagcaagagggggttcact
aaaggcccgtccaatgcctttaagatagtgaagatgatcatggagcggaactttgcacca
gttatcgccttcagcttcagtaagaaggagtgtgaggcgtacgcactgcagatgtctaaa
ctggacttcaacacagatgaggagaagaagctcgtggaggaagttttcttcaatgccatc
gactgtctgtcagatgaagacaagaaactgcctcaggtggaacatgttctgcccctgctg
aagcgaggcatcgggatccaccacggtgggctgctgcccatcctgaaggagaccatcgag
atcctcttctctgagggactcatcaaggccctgtttgctacagagaccttctccatgggg
ctgaacatgccggccagaactgtgctcttcaccagcgctcgcaagtttgacggcaaggac
ttcagatgggtgtcgtcgggtgagtatatccagatgagcggccgtgcggggagacgaggt
ctggacgagagaggaatcgtcatcctcatgatcgatgagaagatgggaccaagtgtcggc
aagaacctcctcaagggagcgcccgaccccctgaacagtgcatttcacctgacctacaac
atggttctgaacctgctgagagtggaggagatcaaccctgagttcatgctggagaagtcc
ttctaccagtaccagaactacagctccataccaggcatgattactaaactacagaagcta
caggaagactacaatgccatgacgattcccgaggaagactccatcacagcgtactacaag
ctccgtcagcagctagacaaacatggtcaggagattgaggggttcatccacaagcccaag
tactgtctgcccttcctgcagcccgggcgactggtgaaggtcagaaacgctgaagatgac
ttcggctggggcgtcgttatcaacttccagaagaaggccaaccagaaggcccccaacaac
agctccgcggagcccttgtacgtggcagaggttctgctgctctgctctaaggagtctgtc
cgcaacgcctccacggagtctgccaagccgtgcagggcgggggagaagggcgagatggtg
gtggttcccatcatgcttcacctgatccgctccatcagcagcgtgcggctctacatcccc
aaggacctccgacccccggacaatcgggagagcgtgctcaagtccatacaggaggtccag
agaagattcccccacggtgttccgctgctggacccgatagaagacctgggcatcaaggac
gaccagctcaagactactgtcaggaaaattgaggcatttgaacaccgtatgtactcccac
cccctccactctgaccagagactgccagaactgtactcactggtggagaaaaaggcacag
ttggctggagagctgaaggcagccaaacgtgaagtgaagaaggcgcgtacgattatccag
atggacgagctgaagtgccgtaagcgggtgctgaggagactgggatacgccacgaccgct
gacgtcatcgagatgaaggggagggtcgcctgcgagatcagcagtgccgatgagctgctc
cttactgagatgatcttcaacggagtcttcaatgaccttgatgctcaccagtgtgtggca
cttcttagtgtcttcgtcttccaagaaaaggcttcagagatgcccagactgacagaagag
ctggccgggcccctcagacagatgcaggagtcagcgcggaggattgctaaggtgtctgcg
gaggctaagatgtctatagaggaggaggagtacgtggagtcgttccgcccccacatgatg
gatgtctgtcacgcctggagcaagggtgcgaccttcgctcagatctgcaagatgactgac
atctttgaaggaagtataatccggtgcatgagaaggctggaggagttgatgagggaaatg
tgccacgccgccaaggccatcgggaacactgagctagagaacaagtttgctgacggcatc
accaagatcaagagagacatcgtgtttgcagccagcctgtacctgtga
DBGET
integrated database retrieval system
