Branchiostoma belcheri (Belcher's lancelet): 109467206
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Entry
109467206 CDS
T07532
Name
(RefSeq) nucleoporin NDC1-like
KO
K14315
nucleoporin NDC1
Organism
bbel
Branchiostoma belcheri (Belcher's lancelet)
Pathway
bbel03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bbel00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109467206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbel03019
]
109467206
Messenger RNA biogenesis [BR:
bbel03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109467206
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
109467206
NCBI-ProteinID:
XP_019620709
UniProt:
A0A6P4YFA3
LinkDB
All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
MASKPHWFMQEVFLFRTIASQLWAVLLVPVGVYSLLLTTKVDLLHPWRWIIGCLFEAVSP
YNWGYLLLLWGVVVVGGTSHARHLTVSPTIPQTRLARLVQLLSPSSLVHAGTHVVMAMVM
SYCAAALIGPQFSSLSLPCQGSEENDRETVGPLHCLNEKSVFVVFSGAFLGLCYSLQYFL
HTRHRLQFPVIQQAKFFRVRTLLPQLVVDSAYRVLRLLPGYYLGYYLLGHGVKTWMCALL
QLNPSPVALSSLPGLLDVGLLWQAAVGGTFLFCLLDTSWLLLHIFHAQVFKFEVTSSLAD
QTDRCLSDAVQCQDVPLVQHLGFLDLSLLAQYSPQRRKHIFSLSQPGGHPYIWKTVSTSS
LAVLDSLTNRLAACRHNIGVTGQRLSPDPSRVQGSQKGQATGKMDRVAQGLRRTPVLAYF
LQQLPEAASAELFKDAQLVVWVLEGLSHLVAASYTEDTYGVVQKSLPDVLTALLGLHEAL
DRHFKMPLAGTRPSQHARLPCQRDVSGQNMRFSLLPAVTTALYHIVNVFGKHAESIPLSP
EHKQKLRLFLPQTDAPGIPRS
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgaagccgcactggttcatgcaagaggtgttcctgtttcgcactattgccagc
cagctgtgggccgtactactggtgccggtgggggtgtacagcctcctcctcacaacaaaa
gtggacctgctccacccatggagatggattataggttgtttgtttgaagctgtgtctccg
tacaactggggttacctgctgctgctgtggggagtagtggtggtggggggcaccagtcat
gccaggcacctcacagtgtcccccaccatcccccagacaagactagccaggctggtccag
ctcctcagcccctccagcctggtgcatgcggggacacacgtcgtcatggcgatggtgatg
tcatactgtgcggcggccctgattggtccacagttctcctccctgtcactgccgtgtcaa
gggtcagaagagaacgatagggagactgttggacccctccactgcctgaatgagaagagt
gtttttgtggtgttttctggagcctttctgggcctatgttacagtctacagtacttccta
cataccagacaccggctgcagttccctgtcattcagcaagccaagtttttccgtgtgcgg
accctgctcccccagctggtggtggactctgcgtaccgcgtcctgcgactgttgcctgga
tactacctcgggtactacctactgggtcatggtgtgaagacttggatgtgtgcactgcta
cagctgaaccccagtccagttgctctcagcagcctgcctggcctgttagatgtaggtctc
ctgtggcaggcggctgtcggcgggaccttcctgttctgtctactggacacatcatggctg
ctgctgcacatcttccacgctcaggtgtttaagtttgaggtgacgtccagcctggcagac
cagactgaccgatgcttgtcagacgcagtccagtgtcaggacgtgcctctggtccagcac
ctaggtttcctggacctgtccctgctggcccagtactcccctcagcgcaggaaacacatc
ttcagcctcagtcagccaggaggccacccgtacatatggaagaccgtcagtacctctagc
cttgccgtgctggactctctcaccaaccgactagcagcctgcaggcacaacatcggggtc
acagggcagaggttaagccctgacccctccagggttcaggggtcacagaaaggtcaggcc
acagggaagatggacagggttgcccaggggttgagaaggacccctgtcctggcgtatttc
ttacaacagctcccagaggcagccagtgctgagctcttcaaggatgcccaactcgtggtc
tgggtcctggaaggtctgtcccaccttgtggctgcctcctacaccgaggacacgtacgga
gttgtgcagaaatctctgcctgatgttctcactgcacttttgggactacacgaggcactg
gaccgacatttcaagatgcccttggcgggaacacgtccctcccagcatgctcggttgcca
tgccaacgggacgtttcaggccaaaacatgcgattttccctgctgccagctgtcaccacc
gctctgtaccacatcgtcaacgtgttcgggaaacatgcggagtccatccctttgtcacca
gaacacaaacagaagctgaggcttttcctgcctcaaactgacgcaccagggatccccagg
agctag
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